Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0224
(606 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 29 0.035
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 1.3
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 24 1.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.3
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 1.8
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 1.8
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 1.8
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 1.8
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 3.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 4.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 4.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 4.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 4.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 4.1
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 4.1
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 21 7.1
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 7.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 7.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 9.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.4
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.4
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 29.1 bits (62), Expect = 0.035
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 296 PEANETAELQQLVDLKNNIVTNYKNGNFRN 385
P+A L + +DL N ++N+ NG+FRN
Sbjct: 447 PDALRDLALLKTLDLGENRISNFYNGSFRN 476
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 344 NNIVTNYKNGNFRNTNH 394
NN NY N N+ N N+
Sbjct: 92 NNYKYNYNNNNYNNNNY 108
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 344 NNIVTNYKNGNFRNTNH 394
NN NY N N+ N N+
Sbjct: 92 NNYKYNYNNNNYNNNNY 108
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 344 NNIVTNYKNGNFRNTNH 394
NN NY N N+ N N+
Sbjct: 327 NNYKYNYNNNNYNNNNY 343
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +2
Query: 275 SRHGSHNPEANETAELQQLVD-LKNNI----VTNYKNGNFRNTNHR 397
SR S + + E ++ +++ L NN NY N N+ N N++
Sbjct: 63 SRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYK 108
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +2
Query: 275 SRHGSHNPEANETAELQQLVD-LKNNI----VTNYKNGNFRNTNHR 397
SR S + + E ++ +++ L NN NY N N+ N N++
Sbjct: 63 SRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYK 108
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +2
Query: 275 SRHGSHNPEANETAELQQLVD-LKNNI----VTNYKNGNFRNTNHR 397
SR S + + E ++ +++ L NN NY N N+ N N++
Sbjct: 63 SRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYK 108
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +2
Query: 275 SRHGSHNPEANETAELQQLVD-LKNNI----VTNYKNGNFRNTNHR 397
SR S + + E ++ +++ L NN NY N N+ N N++
Sbjct: 63 SRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYK 108
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 381 GTLIIESARPTLTCWN 428
G L+ A TL+CWN
Sbjct: 314 GVLLFGLANNTLSCWN 329
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = +2
Query: 344 NNIVTNYKNGNFRNTNHRICTADFNLLER 430
+++ NY N+ N N++ + N +E+
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = +2
Query: 344 NNIVTNYKNGNFRNTNHRICTADFNLLER 430
+++ NY N+ N N++ + N +E+
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = +2
Query: 344 NNIVTNYKNGNFRNTNHRICTADFNLLER 430
+++ NY N+ N N++ + N +E+
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = +2
Query: 344 NNIVTNYKNGNFRNTNHRICTADFNLLER 430
+++ NY N+ N N++ + N +E+
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = +2
Query: 344 NNIVTNYKNGNFRNTNHRICTADFNLLER 430
+++ NY N+ N N++ + N +E+
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/52 (21%), Positives = 25/52 (48%)
Frame = +2
Query: 275 SRHGSHNPEANETAELQQLVDLKNNIVTNYKNGNFRNTNHRICTADFNLLER 430
S+ S + E ++ +++ +N NY N + N N++ + N +E+
Sbjct: 285 SKERSRDRRERERSKEPKIISSLSNSC-NYSNNYYNNNNYKKLYYNINYIEQ 335
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 47 GPKTARDATSHNG 9
GP+T R SHNG
Sbjct: 1 GPRTRRVKRSHNG 13
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = +2
Query: 344 NNIVTNYKNGNFRNTNHRICTADFNLLER 430
+++ NY N+ N N++ + N +E+
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNINHIEQ 111
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 347 NIVTNYKNGNFRNTNHRI 400
N NY N N+ N N ++
Sbjct: 328 NNYNNYNNNNYNNYNKKL 345
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = +2
Query: 278 RHGSHNPEANETAELQQLVDLKNNIVTNYKNGNFRNTNH 394
R S P+ + + + + N NY N N+ N N+
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNY 111
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 344 NNIVTNYKNGNFRN 385
NN NY N N+ N
Sbjct: 335 NNNYNNYNNNNYNN 348
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +2
Query: 308 ETAELQQLVDLKNNIVTNYKNGNFRNTNHRICT 406
+ E +Q ++ KN+ + + + NT ++ CT
Sbjct: 161 QNKEEEQTINRKNSDYLDNQEVSMENTENKSCT 193
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,749
Number of Sequences: 438
Number of extensions: 3545
Number of successful extensions: 26
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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