Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0223
         (644 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-12|CAO78731.1|  318|Caenorhabditis elegans Hypothetical p...    89   2e-18
Z78417-11|CAE17739.1|  294|Caenorhabditis elegans Hypothetical p...    89   2e-18
AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical...    29   2.8  
Z83123-8|CAB05613.2|  330|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL021487-11|CAA16355.2|  330|Caenorhabditis elegans Hypothetical...    28   4.9  
Z68114-8|CAA92162.1|  317|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z78417-12|CAO78731.1|  318|Caenorhabditis elegans Hypothetical
           protein C35C5.10b protein.
          Length = 318

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 44/107 (41%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
 Frame = +1

Query: 325 IYLLNPCHVTTLIQIYLLAAP-PSKIVTALFRIHLYLLNGPLLAFLFPETASRKIFVEAA 501
           I+LLNPCHVTT +Q+ LL     SK    LFR+ LY + G   A  FP   +R +  E  
Sbjct: 117 IFLLNPCHVTTTMQLMLLTMEGTSKKACFLFRLMLYFMPGAWFALAFPILNTRNLPGEVF 176

Query: 502 LYWIQHGMMCIIPYYLLRLGGVYNIEPIRDFNWSVFSYCLNLLYHFI 642
           +Y+ QH  + ++P YL+ + G +  E   DF W+VF   L  LYHF+
Sbjct: 177 IYYAQHVAILVVPVYLMYIQGAFEPEKPYDFGWTVFGISLFSLYHFV 223


>Z78417-11|CAE17739.1|  294|Caenorhabditis elegans Hypothetical
           protein C35C5.10a protein.
          Length = 294

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 44/107 (41%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
 Frame = +1

Query: 325 IYLLNPCHVTTLIQIYLLAAP-PSKIVTALFRIHLYLLNGPLLAFLFPETASRKIFVEAA 501
           I+LLNPCHVTT +Q+ LL     SK    LFR+ LY + G   A  FP   +R +  E  
Sbjct: 93  IFLLNPCHVTTTMQLMLLTMEGTSKKACFLFRLMLYFMPGAWFALAFPILNTRNLPGEVF 152

Query: 502 LYWIQHGMMCIIPYYLLRLGGVYNIEPIRDFNWSVFSYCLNLLYHFI 642
           +Y+ QH  + ++P YL+ + G +  E   DF W+VF   L  LYHF+
Sbjct: 153 IYYAQHVAILVVPVYLMYIQGAFEPEKPYDFGWTVFGISLFSLYHFV 199


>AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical
           protein Y57A10A.27 protein.
          Length = 388

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +2

Query: 11  RWRRSSTRML*KCSNGRYSGANKAVPRS 94
           RW++ S+++  +CSNG  +GA  AV +S
Sbjct: 146 RWKQLSSKLDEECSNGEAAGALSAVEQS 173


>Z83123-8|CAB05613.2|  330|Caenorhabditis elegans Hypothetical
           protein T04A11.10 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 158 YNYSFNNFS-PGVSKRRHIQGPHFLGQLYLHHYTAHSNI 45
           Y + F +F  P +   R ++GP+  G LY+H   +  N+
Sbjct: 164 YPFPFISFMLPAIGVCRQLRGPYEFGSLYIHFKDSWHNV 202


>AL021487-11|CAA16355.2|  330|Caenorhabditis elegans Hypothetical
           protein Y45F10B.4 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 158 YNYSFNNFS-PGVSKRRHIQGPHFLGQLYLHHYTAHSNI 45
           Y + F +F  P +   R ++GP+  G LY+H   +  N+
Sbjct: 164 YPFPFISFMLPAIGVCRQLRGPYEFGSLYIHFTDSWHNV 202


>Z68114-8|CAA92162.1|  317|Caenorhabditis elegans Hypothetical
           protein F17A2.11 protein.
          Length = 317

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 480 EDFCGSCLVLDTTWYDVYYTLLFIETWRR 566
           E +C S LVL  T++D Y TL  +  +R+
Sbjct: 266 EQYCISVLVLLPTFFDPYITLYSVAPYRK 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,297,438
Number of Sequences: 27780
Number of extensions: 333949
Number of successful extensions: 796
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)