Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0222
         (562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.7  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   8.5  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   8.5  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   8.5  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   8.5  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   8.5  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 209 ISDVFVCTELNEFTVRFSLATSAN 138
           ISD+FV  +LN++  R + +   N
Sbjct: 116 ISDLFVFDDLNDYINRLNYSAFVN 139


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 482 YVY*YNNTTHSLNC 441
           Y Y YNN  ++ NC
Sbjct: 96  YKYNYNNNNYNNNC 109


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 482 YVY*YNNTTHSLNC 441
           Y Y YNN  ++ NC
Sbjct: 96  YKYNYNNNNYNNNC 109


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 482 YVY*YNNTTHSLNC 441
           Y Y YNN  ++ NC
Sbjct: 96  YKYNYNNNNYNNNC 109


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 482 YVY*YNNTTHSLNC 441
           Y Y YNN  ++ NC
Sbjct: 96  YKYNYNNNNYNNNC 109


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 530 QLICLRFILTCAKCIMYV 477
           Q+ICL  ++     IMY+
Sbjct: 400 QMICLIVVIALVSIIMYI 417


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,087
Number of Sequences: 438
Number of extensions: 2446
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)