Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0222
         (562 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99...    28   4.9  
At2g26530.1 68415.m03183 expressed protein                             27   6.5  

>At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99829
           Copine I {Homo sapiens}
          Length = 489

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 108 IDFTTTXPWQYTSSYALNKYPHISHTPN 25
           IDFT +  W    S+      H+S+TPN
Sbjct: 161 IDFTKSNEWTGAKSFNRKSLHHLSNTPN 188


>At2g26530.1 68415.m03183 expressed protein
          Length = 317

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 94  SCKINYTGSW-IEVRSLAEVASEKRTVNSFNSVQTNTSLINEADDLNFISTR 246
           SCK + +  W ++   L   ASE R  ++ +SV+T TSL  + +D    S+R
Sbjct: 226 SCKSSSSKKWRLKDFLLFRSASEGRARHNKDSVKTFTSLFRKQEDTKNSSSR 277


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,100,143
Number of Sequences: 28952
Number of extensions: 172361
Number of successful extensions: 337
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)