Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0219
         (545 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC151239-1|AAI51240.1| 1299|Homo sapiens TBC1D4 protein protein.       30   6.1  
AL162571-2|CAI39591.1| 1298|Homo sapiens TBC1 domain family, mem...    30   6.1  
AL139230-1|CAH70991.1| 1298|Homo sapiens TBC1 domain family, mem...    30   6.1  
AB011175-1|BAA25529.2| 1348|Homo sapiens KIAA0603 protein protein.     30   6.1  

>BC151239-1|AAI51240.1| 1299|Homo sapiens TBC1D4 protein protein.
          Length = 1299

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +3

Query: 150  FVALFLIATVIPLKTNANIFGGKCSRQDPNVDACLLRSFNNLVDYLKGGAPEMGIEEAEP 329
            F  +FL  T +  K   ++     S Q+  +  C   SF N+V++LK   P+M   E E 
Sbjct: 1106 FDIIFLQGTEVIFKVALSLL----SSQETLIMEC--ESFENIVEFLKNTLPDMNTSEMEK 1159

Query: 330  IV 335
            I+
Sbjct: 1160 II 1161


>AL162571-2|CAI39591.1| 1298|Homo sapiens TBC1 domain family, member 4
            protein.
          Length = 1298

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +3

Query: 150  FVALFLIATVIPLKTNANIFGGKCSRQDPNVDACLLRSFNNLVDYLKGGAPEMGIEEAEP 329
            F  +FL  T +  K   ++     S Q+  +  C   SF N+V++LK   P+M   E E 
Sbjct: 1105 FDIIFLQGTEVIFKVALSLL----SSQETLIMEC--ESFENIVEFLKNTLPDMNTSEMEK 1158

Query: 330  IV 335
            I+
Sbjct: 1159 II 1160


>AL139230-1|CAH70991.1| 1298|Homo sapiens TBC1 domain family, member 4
            protein.
          Length = 1298

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +3

Query: 150  FVALFLIATVIPLKTNANIFGGKCSRQDPNVDACLLRSFNNLVDYLKGGAPEMGIEEAEP 329
            F  +FL  T +  K   ++     S Q+  +  C   SF N+V++LK   P+M   E E 
Sbjct: 1105 FDIIFLQGTEVIFKVALSLL----SSQETLIMEC--ESFENIVEFLKNTLPDMNTSEMEK 1158

Query: 330  IV 335
            I+
Sbjct: 1159 II 1160


>AB011175-1|BAA25529.2| 1348|Homo sapiens KIAA0603 protein protein.
          Length = 1348

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +3

Query: 150  FVALFLIATVIPLKTNANIFGGKCSRQDPNVDACLLRSFNNLVDYLKGGAPEMGIEEAEP 329
            F  +FL  T +  K   ++     S Q+  +  C   SF N+V++LK   P+M   E E 
Sbjct: 1155 FDIIFLQGTEVIFKVALSLL----SSQETLIMEC--ESFENIVEFLKNTLPDMNTSEMEK 1208

Query: 330  IV 335
            I+
Sbjct: 1209 II 1210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,039,772
Number of Sequences: 237096
Number of extensions: 1588449
Number of successful extensions: 10471
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10471
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)