Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0215
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   5.4  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   7.1  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   9.4  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    20   9.4  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 340 QRFHQEHDHRNLS 378
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 4/11 (36%), Positives = 7/11 (63%)
 Frame = -2

Query: 151 HHICRSSDQWW 119
           HH+ ++   WW
Sbjct: 88  HHLIKNKPNWW 98


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = -3

Query: 309 YLLVSNFPESNIDCDTTLTLS 247
           ++++SN+ +  ++ DT+ T S
Sbjct: 600 FVMISNYADDRVEQDTSGTCS 620


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 46  LTKNGQGKDHINIVVIGHVDSG 111
           +T NG    H+NI  I   D G
Sbjct: 466 VTVNGDVVSHLNITAIHTNDGG 487


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 417 PVPAATMSTAQSA 379
           P+P  T STA SA
Sbjct: 201 PIPQRTASTASSA 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,323
Number of Sequences: 336
Number of extensions: 2047
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)