Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0215
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 160 5e-40
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 160 5e-40
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 160 5e-40
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 160 5e-40
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 131 3e-31
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 97 5e-21
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 97 5e-21
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 87 6e-18
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 54 6e-08
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 54 6e-08
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 54 6e-08
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 51 3e-07
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 51 3e-07
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.001
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 37 0.006
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 34 0.042
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 34 0.042
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 31 0.29
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 31 0.29
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.29
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 0.68
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 30 0.68
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.89
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.2
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.2
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z66500-3|CAA91310.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 4.8
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 160 bits (388), Expect = 5e-40
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = +1
Query: 58 GQGKDHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 237
G+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 238 KLKAERERGITIDIALWE 291
KLKAERERGITIDIALW+
Sbjct: 62 KLKAERERGITIDIALWK 79
Score = 110 bits (264), Expect = 5e-25
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +2
Query: 290 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 448
KFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 79 KFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 160 bits (388), Expect = 5e-40
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = +1
Query: 58 GQGKDHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 237
G+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 238 KLKAERERGITIDIALWE 291
KLKAERERGITIDIALW+
Sbjct: 62 KLKAERERGITIDIALWK 79
Score = 83.0 bits (196), Expect = 9e-17
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +2
Query: 290 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 406
KFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 79 KFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 160 bits (388), Expect = 5e-40
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = +1
Query: 58 GQGKDHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 237
G+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 238 KLKAERERGITIDIALWE 291
KLKAERERGITIDIALW+
Sbjct: 62 KLKAERERGITIDIALWK 79
Score = 110 bits (264), Expect = 5e-25
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +2
Query: 290 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 448
KFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 79 KFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 160 bits (388), Expect = 5e-40
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = +1
Query: 58 GQGKDHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 237
G+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 238 KLKAERERGITIDIALWE 291
KLKAERERGITIDIALW+
Sbjct: 62 KLKAERERGITIDIALWK 79
Score = 110 bits (264), Expect = 5e-25
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +2
Query: 290 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 448
KFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 79 KFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 131 bits (316), Expect = 3e-31
Identities = 60/66 (90%), Positives = 62/66 (93%)
Frame = +1
Query: 58 GQGKDHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 237
G+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 238 KLKAER 255
KLK +
Sbjct: 62 KLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 97.1 bits (231), Expect = 5e-21
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = +1
Query: 67 KDHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 246
KD IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ +
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 227
Query: 247 AERERGITIDI 279
ERERG+T+DI
Sbjct: 228 EERERGVTMDI 238
Score = 75.8 bits (178), Expect = 1e-14
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 293 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 448
FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G G
Sbjct: 243 FETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 294
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 97.1 bits (231), Expect = 5e-21
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = +1
Query: 67 KDHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 246
KD IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ +
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 245
Query: 247 AERERGITIDI 279
ERERG+T+DI
Sbjct: 246 EERERGVTMDI 256
Score = 75.8 bits (178), Expect = 1e-14
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 293 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 448
FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G G
Sbjct: 261 FETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 312
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 87.0 bits (206), Expect = 6e-18
Identities = 36/75 (48%), Positives = 56/75 (74%)
Frame = +1
Query: 55 NGQGKDHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 234
+G K+HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +
Sbjct: 103 DGTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCM 162
Query: 235 DKLKAERERGITIDI 279
D ERE+G T+++
Sbjct: 163 DTNDEEREKGKTVEV 177
Score = 70.1 bits (164), Expect = 7e-13
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +2
Query: 293 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 448
FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + G
Sbjct: 182 FETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGG 233
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 53.6 bits (123), Expect = 6e-08
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 290 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 106 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 148
Score = 34.7 bits (76), Expect = 0.031
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 67 KDHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 237
K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ L+
Sbjct: 47 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLE 106
Query: 238 KLKAER 255
A+R
Sbjct: 107 YETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 53.6 bits (123), Expect = 6e-08
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 290 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
Score = 34.7 bits (76), Expect = 0.031
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 67 KDHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 237
K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ L+
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLE 107
Query: 238 KLKAER 255
A+R
Sbjct: 108 YETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 53.6 bits (123), Expect = 6e-08
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 290 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
Score = 34.7 bits (76), Expect = 0.031
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 67 KDHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 237
K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ L+
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLE 107
Query: 238 KLKAER 255
A+R
Sbjct: 108 YETAKR 113
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 51.2 bits (117), Expect = 3e-07
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +2
Query: 326 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 427
D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Score = 30.3 bits (65), Expect = 0.68
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 67 KDHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 240
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 241 LKAERERGITIDIA 282
K E++RGITI++A
Sbjct: 86 GKEEKKRGITINVA 99
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 51.2 bits (117), Expect = 3e-07
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +2
Query: 326 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 427
D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Score = 30.3 bits (65), Expect = 0.68
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 67 KDHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 240
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 241 LKAERERGITIDIA 282
K E++RGITI++A
Sbjct: 86 GKEEKKRGITINVA 99
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.5 bits (88), Expect = 0.001
Identities = 29/68 (42%), Positives = 35/68 (51%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 258
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 259 RGITIDIA 282
RGIT+ A
Sbjct: 74 RGITVQSA 81
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 258
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 259 RGITIDIA 282
RGITI A
Sbjct: 96 RGITIQSA 103
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 314 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
+ IID PGH DF + D AVL++ G G
Sbjct: 114 INIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 34.3 bits (75), Expect = 0.042
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 314 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
VT +D PGH F G AD VL+VAA G
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 34.3 bits (75), Expect = 0.042
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 258
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 259 RGITI 273
RGIT+
Sbjct: 86 RGITV 90
Score = 31.5 bits (68), Expect = 0.29
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 308 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
Y + +ID PGH DF + + D +L+VAA G
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.29
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCG 150
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 308 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.29
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCG 150
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 308 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 287 GKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 406
G+F T +V+ +D PGH + M+ G + D A L+VA
Sbjct: 121 GEF-TCVRHVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.3 bits (65), Expect = 0.68
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 299 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
+ Y + IID PGH +F M AD V++V A G
Sbjct: 198 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.3 bits (65), Expect = 0.68
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 299 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
+ Y + IID PGH +F M AD V++V A G
Sbjct: 73 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.89
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 320 IIDAPGHRDFIKNMITGTSQADCAVLIV 403
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 157 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 258
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 157 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 258
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 76 INIVVIGHVDSGKSTTT 126
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 314 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
+ +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 76 INIVVIGHVDSGKSTTT 126
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z66500-3|CAA91310.1| 309|Caenorhabditis elegans Hypothetical
protein T05C12.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 31 VCNP*LTKNGQGKDHINIVVIGHVDSGK--STTTGHLIYKCGGIDKRTIEKFEKEAQEMG 204
+CN + ++G K + +V G GK +TT HL I R +EK E+ A+E+
Sbjct: 12 ICNSPILRDGALKGKVALVTGGGTGIGKAIATTFAHLGASV-AIAARRMEKLEQTAEEIM 70
Query: 205 K 207
K
Sbjct: 71 K 71
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 58 GQGKDHINIVVIGHVDSGKSTTTGHL 135
G GK +NIVV+G +SGK+T L
Sbjct: 12 GLGKKDVNIVVVGLDNSGKTTILNQL 37
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 314 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 409
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 314 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 403
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 314 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 403
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,039,072
Number of Sequences: 27780
Number of extensions: 197346
Number of successful extensions: 568
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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