Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0213
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.7  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.0  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   5.2  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   6.9  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 63   ITVK*LTQNIEWPFNPRAEF 4
            +T+K    +++WPF+P+  F
Sbjct: 1243 LTLKKDLLHLDWPFDPKVNF 1262


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 63   ITVK*LTQNIEWPFNPRAEF 4
            +T+K    +++WPF+P+  F
Sbjct: 1243 LTLKKDLLHLDWPFDPKVNF 1262


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 406 PYFIEPVIAGLDPY 447
           PYF+  + + +DPY
Sbjct: 132 PYFVNQLFSAVDPY 145


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 161  TQSWPFMATTAPP 123
            T +WP   TT PP
Sbjct: 1076 TTNWPTQGTTIPP 1088


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 445 YDNQPYVCNMDLI 483
           Y+N PY  NMD +
Sbjct: 253 YNNYPYYSNMDYL 265


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 418 EPVIAGLDPYDNQPY 462
           EP +  + PY +Q Y
Sbjct: 443 EPAVTAVQPYQDQEY 457


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,938
Number of Sequences: 336
Number of extensions: 2947
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)