Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0213
         (540 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   3.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.6  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   8.1  

>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 34  NILS*SLYSNSKSRRCLSFYITNMSILAY 120
           N++  +L S S S R  +FY+   +IL+Y
Sbjct: 402 NLIPSALQSYSTSMRDPAFYMLYQNILSY 430


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 34  NILS*SLYSNSKSRRCLSFYITNMSILAY 120
           N++  +L S S S R  +FY+    IL+Y
Sbjct: 402 NLIPSALQSYSTSMRDPAFYMLYQKILSY 430


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 439 DPYDNQPYVCNMD 477
           D YDN   VCNM+
Sbjct: 50  DAYDNCITVCNME 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,696
Number of Sequences: 438
Number of extensions: 3466
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)