Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0211
         (470 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 17/83 (20%), Positives = 35/83 (42%)
 Frame = -3

Query: 387 KTSHANDITMSTIKDIDTNSTDVLLKSLGMIAKDLPLIIAMVTLVPLSMRRAISSPFHLY 208
           KT  + + +   +K +  N+TD+ +KSL  +         +   + + +    ++   L 
Sbjct: 96  KTKISFNFSQGPVKIMLQNATDLFIKSLESLKPGNQSTPGIKLSINIILSDPNTNKLKLN 155

Query: 207 VNTALILRPLSVDSFILSRSGAS 139
            N +  L  L  DS  +  S A+
Sbjct: 156 TNESYELTVLKSDSLAVRLSAAN 178


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 183 DVI*VPCSRTSGREKR*RVSLTTA 254
           D + V C+R  GREK+  V L +A
Sbjct: 103 DKVTVFCNRDLGREKQFIVKLPSA 126


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 183 DVI*VPCSRTSGREKR*RVSLTTA 254
           D + V C+R  GREK+  V L +A
Sbjct: 103 DKVTVFCNRDLGREKQFIVKLPSA 126


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 341  ISFIVLMVISLAWLVFYYIQRFRYIHAKDRLSKRLC 448
            I F +LMVI    ++ +    F  I  K +L   LC
Sbjct: 1289 IFFALLMVIQFFAMMIHRFGTFSQIITKTQLDFDLC 1324


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 341  ISFIVLMVISLAWLVFYYIQRFRYIHAKDRLSKRLC 448
            I F +LMVI    ++ +    F  I  K +L   LC
Sbjct: 1289 IFFALLMVIQFFAMMIHRFGTFSQIITKTQLDFDLC 1324


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 183 DVI*VPCSRTSGREKR*RVSLTTA 254
           D + V C+R  GREK+  V L +A
Sbjct: 103 DKVTVFCNRDLGREKQFIVKLPSA 126


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 183 DVI*VPCSRTSGREKR*RVSLTTA 254
           D + V C+R  GREK+  V L +A
Sbjct: 103 DKVTVFCNRDLGREKQFIVKLPSA 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,932
Number of Sequences: 336
Number of extensions: 2114
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)