Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0211
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 95 3e-20
U70854-16|AAB09151.1| 169|Caenorhabditis elegans Hypothetical p... 31 0.55
AF039720-9|AAK68360.2| 676|Caenorhabditis elegans Hypothetical ... 30 0.73
Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical pr... 30 0.96
U28991-3|AAK68309.1| 298|Caenorhabditis elegans Hypothetical pr... 29 1.3
AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical ... 29 1.3
Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical pr... 29 1.7
AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical ... 29 2.2
Z47073-4|CAM33507.1| 954|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z47073-3|CAA87374.1| 999|Caenorhabditis elegans Hypothetical pr... 28 2.9
AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 27 5.1
AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 27 5.1
Z81579-5|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical pr... 27 9.0
AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans nephrocystin-... 27 9.0
AC024765-6|AAF60526.2| 254|Caenorhabditis elegans Smn (survival... 27 9.0
AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical ... 27 9.0
AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical ... 27 9.0
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 94.7 bits (225), Expect = 3e-20
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = +2
Query: 305 KDFNKTSVLFVSISFIVLMVISLAWLVFYYIQRFRYIHAKDRLSKRLCCAAKKAL 469
+ F+KTSVLFVSISFI+LMVISLAWLVFYY+QRFRY HAKDRL +RL AA+KAL
Sbjct: 153 RSFSKTSVLFVSISFIILMVISLAWLVFYYVQRFRYAHAKDRLQRRLFNAARKAL 207
>U70854-16|AAB09151.1| 169|Caenorhabditis elegans Hypothetical
protein F38A5.7 protein.
Length = 169
Score = 30.7 bits (66), Expect = 0.55
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 280 FDYSDGDSGAVVNETRYLFSLPLVR 206
FD++D D V ETR + LP++R
Sbjct: 8 FDFNDSDESVTVRETRIILLLPVIR 32
>AF039720-9|AAK68360.2| 676|Caenorhabditis elegans Hypothetical
protein F33D11.9b protein.
Length = 676
Score = 30.3 bits (65), Expect = 0.73
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -2
Query: 289 GPPFDYSDGDSGAVVNETRYLFSLPLVREHGTYITSVIRGQLHFVEI 149
G DYS+ +G + E + + L R H +Y V+ LHF I
Sbjct: 347 GLSHDYSEKQTGQFIEEVSRMLNNVLERLHQSYFMYVLADDLHFSSI 393
>Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical
protein T21B4.14 protein.
Length = 426
Score = 29.9 bits (64), Expect = 0.96
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = -3
Query: 228 SSPFHLYVNTALILRPLSVDSFILSRSGASRSLYIRTAVALARHAFCTFSSKLQLPRLMR 49
SSP + Y T D F++S+SG + + I VAL F + + P+ M+
Sbjct: 81 SSPLYNYYLTFYNTNCSLDDRFLVSKSGLALTCNIIGLVALPIQIFTGYCILRKTPKTMK 140
Query: 48 AIQGS*G 28
+ GS G
Sbjct: 141 PVMGSLG 147
>U28991-3|AAK68309.1| 298|Caenorhabditis elegans Hypothetical
protein F08F8.6 protein.
Length = 298
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -3
Query: 357 STIKDIDTNSTDVLLKSLGMIAKDLPL-IIAMVTLVPLSMRRAISSPFHL 211
STI+D+D D++ ++ + K LP I+A+ L+P+ + + I P HL
Sbjct: 65 STIQDLDNAIIDLIDEASSTLQK-LPFSIVALQILLPIEICKQICHPNHL 113
>AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical
protein Y39D8B.3 protein.
Length = 731
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -3
Query: 282 PLIIAMVTLVPLSMRRAISSPFHL--YVNTALILRPLSVDSFILS 154
P+I++ + LVP+ + + PF L +V T IL P+++ ILS
Sbjct: 620 PVILSPLCLVPVILSPGVGLPFVLSPFVLTPFILSPVALTPIILS 664
>Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical
protein C07A9.4 protein.
Length = 590
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 221 GEEIARLIDNGTRVTIAIIKGRSFAIIPKDFNKTSVLFVSISFIVLMVISLAWLVF 388
G+ LI G TIA I+G+S ++I + +LF++IS I ++ A F
Sbjct: 504 GQLFNLLIGFGLPFTIAKIQGKSISMIINPTYRLLMLFLAISLIFTLIAMFAQKYF 559
>AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical
protein Y73E7A.3 protein.
Length = 429
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +2
Query: 191 ISAVFTYKWKGEEIARLIDNGTRVTIAIIKGRS----FAIIPKDFNKTSVLFVSISFIVL 358
+S V T ++ E +++++ +GT V+ + S ++++ KTS L ++S +
Sbjct: 260 VSGVQTAVFEQEALSKIVWDGTIVSYFALFAFSMFIFYSLVTVVLQKTSALMFNLSTLTA 319
Query: 359 MVISLAWLVFYYIQRFRYIH 418
SL + +F + F Y++
Sbjct: 320 DFYSLLFGIFMFKDTFHYLY 339
>Z47073-4|CAM33507.1| 954|Caenorhabditis elegans Hypothetical
protein ZC506.4b protein.
Length = 954
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 299 IPKDFNKTSVLFVSISFIVLMVISLAWLVFYY 394
+P++FN+T F+ S V+ L+W+ F++
Sbjct: 817 VPENFNETK--FIGFSMYTTCVVWLSWIFFFF 846
>Z47073-3|CAA87374.1| 999|Caenorhabditis elegans Hypothetical
protein ZC506.4a protein.
Length = 999
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 299 IPKDFNKTSVLFVSISFIVLMVISLAWLVFYY 394
+P++FN+T F+ S V+ L+W+ F++
Sbjct: 862 VPENFNETK--FIGFSMYTTCVVWLSWIFFFF 891
>AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoformb protein.
Length = 1420
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 226 FSLPLVREHGTYITSVIRGQLHFVEIWSIAVVVYKD 119
F PL ++ TY+ V + +H+V+ WS V KD
Sbjct: 565 FLYPL--KYNTYVLDVFKKYIHYVKCWSNCDSVRKD 598
>AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoforma protein.
Length = 1418
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 226 FSLPLVREHGTYITSVIRGQLHFVEIWSIAVVVYKD 119
F PL ++ TY+ V + +H+V+ WS V KD
Sbjct: 565 FLYPL--KYNTYVLDVFKKYIHYVKCWSNCDSVRKD 598
>Z81579-5|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical
protein R13H4.1 protein.
Length = 1305
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +2
Query: 101 RANATAVLIYNDRDAPDLDKMKLSTDNGRNISAVFTYKWKGEEIARLIDNGTRVTI 268
R+N +V I R + ++ D GR++S+V + E++ R I+ + +
Sbjct: 455 RSNRKSVKIETPRSPENSNRFPALVDTGRSVSSVDELRSINEDLNRFIEEPMEIPV 510
>AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans
nephrocystin-4-like protein protein.
Length = 1305
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +2
Query: 101 RANATAVLIYNDRDAPDLDKMKLSTDNGRNISAVFTYKWKGEEIARLIDNGTRVTI 268
R+N +V I R + ++ D GR++S+V + E++ R I+ + +
Sbjct: 455 RSNRKSVKIETPRSPENSNRFPALVDTGRSVSSVDELRSINEDLNRFIEEPMEIPV 510
>AC024765-6|AAF60526.2| 254|Caenorhabditis elegans Smn (survival of
motor neuron)protein interactor protein 1, isoform a
protein.
Length = 254
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 28 TSRALDCSHKTRQLQF*TKGAERVARQRYRSPYIQRPRCSRSRQ 159
TS A+ + RQ+Q +G + V R +SP P + +Q
Sbjct: 21 TSPAMSAAQYLRQMQAERRGTKNVVRIAQKSPDSTSPEAKKQKQ 64
>AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5a protein.
Length = 599
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 378 GSSSTTYNVSDIYTPKTGSLNVCAALRRK 464
G ++ + +TPKT + N+C+ LRR+
Sbjct: 495 GPDDVYFSCTIEFTPKTKAPNICSKLRRR 523
>AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5b protein.
Length = 601
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 378 GSSSTTYNVSDIYTPKTGSLNVCAALRRK 464
G ++ + +TPKT + N+C+ LRR+
Sbjct: 497 GPDDVYFSCTIEFTPKTKAPNICSKLRRR 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,754,192
Number of Sequences: 27780
Number of extensions: 217524
Number of successful extensions: 702
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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