Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0211
(470 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g71980.1 68414.m08320 protease-associated zinc finger (C3HC4-... 48 3e-06
At1g22670.1 68414.m02833 protease-associated zinc finger (C3HC4-... 46 1e-05
At1g35625.1 68414.m04426 protease-associated zinc finger (C3HC4-... 46 1e-05
At5g66160.2 68418.m08334 protease-associated zinc finger (C3HC4-... 42 2e-04
At5g66160.1 68418.m08335 protease-associated zinc finger (C3HC4-... 42 2e-04
At1g63690.2 68414.m07208 protease-associated (PA) domain-contain... 40 8e-04
At1g63690.1 68414.m07207 protease-associated (PA) domain-contain... 40 8e-04
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 40 0.001
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 40 0.001
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 40 0.001
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 40 0.001
At2g43070.1 68415.m05344 protease-associated (PA) domain-contain... 39 0.001
At4g20110.1 68417.m02943 vacuolar sorting receptor, putative sim... 36 0.014
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 35 0.024
At2g34940.1 68415.m04289 vacuolar sorting receptor, putative sim... 35 0.032
At4g09560.1 68417.m01571 protease-associated zinc finger (C3HC4-... 34 0.042
At1g05820.1 68414.m00609 protease-associated (PA) domain-contain... 33 0.074
At1g35630.1 68414.m04427 protease-associated zinc finger (C3HC4-... 33 0.098
At5g47380.1 68418.m05839 expressed protein contains Pfam profile... 29 1.2
At5g44120.3 68418.m05400 12S seed storage protein (CRA1) nearly ... 28 3.7
At5g44120.2 68418.m05399 12S seed storage protein (CRA1) nearly ... 28 3.7
At5g44120.1 68418.m05398 12S seed storage protein (CRA1) nearly ... 28 3.7
At3g47120.1 68416.m05116 RNA recognition motif (RRM)-containing ... 27 4.8
At3g14300.1 68416.m01809 pectinesterase family protein contains ... 27 4.8
At4g25360.1 68417.m03649 expressed protein 27 6.4
At5g01360.1 68418.m00049 expressed protein several hypothetical ... 27 8.5
At4g36080.1 68417.m05136 FAT domain-containing protein / phospha... 27 8.5
At4g18810.1 68417.m02777 expressed protein similar to UV-B and o... 27 8.5
At1g67530.1 68414.m07694 armadillo/beta-catenin repeat family pr... 27 8.5
>At1g71980.1 68414.m08320 protease-associated zinc finger
(C3HC4-type RING finger) family protein identical to
ReMembR-H2 protein JR702 [Arabidopsis thaliana]
gi|6942149|gb|AAF32326; contains Pfam domain, PF02225:
protease-associated (PA) domain and Pfam domain,
PF00097: Zinc finger, C3HC4 type (RING finger);
identical to cDNA ReMembR-H2 protein JR702 mRNA, partial
cds GI:6942148
Length = 448
Score = 48.0 bits (109), Expect = 3e-06
Identities = 39/130 (30%), Positives = 58/130 (44%)
Frame = +2
Query: 50 LIRRGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKLSTDNGRNISAVFTYKWKGEE 229
LI RG C+FE KV+ A RA A +IY++ D L M G I AVF K GE
Sbjct: 81 LIVRGGCSFEEKVRKAQRAGFKAAIIYDNEDRGTLIAM-AGNSGGIRIHAVFVTKETGEV 139
Query: 230 IARLIDNGTRVTIAIIKGRSFAIIPKDFNKTSVLFVSISFIVLMVISLAWLVFYYIQRFR 409
+ A +IP F ++ +++SFI L+ +S ++++R R
Sbjct: 140 LKE---------YAGFPDTKVWLIP-SFENSAWSIMAVSFISLLAMSAVLATCFFVRRHR 189
Query: 410 YIHAKDRLSK 439
R S+
Sbjct: 190 IRRRTSRSSR 199
>At1g22670.1 68414.m02833 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 422
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 44 IALIRRGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKLSTDNGRNISAVFTYKWKG 223
+ LI RG C+FE KV+NA R+ A ++Y++ D L M +D G I AVF K G
Sbjct: 81 LVLIIRGGCSFEYKVRNAQRSGFKAAIVYDNVDRNFLSAMGGDSD-GIKIQAVFVMKRAG 139
Query: 224 EEIAR 238
E + +
Sbjct: 140 EMLKK 144
>At1g35625.1 68414.m04426 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 279
Score = 46.0 bits (104), Expect = 1e-05
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Frame = +2
Query: 38 PWIALIRRGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKLSTDNGRNISAVFTYKW 217
P LI RG C+FE K++NA A A ++YNDR L + S G I V +
Sbjct: 40 PSYVLIVRGGCSFEEKIRNAQEAGYKAAIVYNDRYEELLVRRNSS---GVYIHGVLVTRT 96
Query: 218 KGEEIARLIDNGTRVTIAIIKGRSFAIIPKDFNKTSVLFVSISFIVLMVISLAWLVFYYI 397
G E+ + + + + +I G F +S ++I+F+ L+VIS ++ +
Sbjct: 97 SG-EVLKEYTSRAEMELLLIPG---------FGISSWSIMAITFVSLLVISAVLASYFSV 146
Query: 398 QRFRY-IHAKD 427
+R R H +D
Sbjct: 147 RRHRIRQHVRD 157
>At5g66160.2 68418.m08334 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326; identical
to cDNA ReMembR-H2 protein JR700 mRNA, complete cds
GI:6942146
Length = 290
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +2
Query: 47 ALIRRGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKLSTDNGRNISAVFTYKWKGE 226
ALI RG C+FE K+ NA + AV++Y++ D DL MK++ + + AVF GE
Sbjct: 85 ALIIRGECSFEDKLLNAQNSGFQAVIVYDNIDNEDLIVMKVNPQD-ITVDAVFVSNVAGE 143
>At5g66160.1 68418.m08335 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326; identical
to cDNA ReMembR-H2 protein JR700 mRNA, complete cds
GI:6942146
Length = 310
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +2
Query: 47 ALIRRGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKLSTDNGRNISAVFTYKWKGE 226
ALI RG C+FE K+ NA + AV++Y++ D DL MK++ + + AVF GE
Sbjct: 85 ALIIRGECSFEDKLLNAQNSGFQAVIVYDNIDNEDLIVMKVNPQD-ITVDAVFVSNVAGE 143
>At1g63690.2 68414.m07208 protease-associated (PA) domain-containing
protein contains protease associated (PA) domain,
Pfam:PF02225
Length = 540
Score = 39.9 bits (89), Expect = 8e-04
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +2
Query: 44 IALIRRGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKL---STDNGRNISAVFTYK 214
+ ++ RG+C F K NA A A+A+LI N++ +L KM TD I AV +
Sbjct: 107 VVIVERGNCRFTAKANNAEAAGASALLIINNQ--KELYKMVCEPDETDLDIQIPAVMLPQ 164
Query: 215 WKGEEIARLIDNGTRVTIAIIKGRSFAI 298
G + +++ N ++V+ + R A+
Sbjct: 165 DAGASLQKMLANSSKVSAQLYSPRRPAV 192
>At1g63690.1 68414.m07207 protease-associated (PA) domain-containing
protein contains protease associated (PA) domain,
Pfam:PF02225
Length = 540
Score = 39.9 bits (89), Expect = 8e-04
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +2
Query: 44 IALIRRGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKL---STDNGRNISAVFTYK 214
+ ++ RG+C F K NA A A+A+LI N++ +L KM TD I AV +
Sbjct: 107 VVIVERGNCRFTAKANNAEAAGASALLIINNQ--KELYKMVCEPDETDLDIQIPAVMLPQ 164
Query: 215 WKGEEIARLIDNGTRVTIAIIKGRSFAI 298
G + +++ N ++V+ + R A+
Sbjct: 165 DAGASLQKMLANSSKVSAQLYSPRRPAV 192
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +2
Query: 38 PWIALIRRGSCNFELKVQNAWRANATAVLIYND-------RDAPDLDKMKLSTDNGRNIS 196
P L+ RG C F LKV NA +A A+AVL+ ++ D P+ D I
Sbjct: 93 PTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIP 152
Query: 197 AVFTYKWKGEEIARLIDNGTRVTI 268
+ K GE++ + I G V +
Sbjct: 153 SALVTKGFGEKLKKAISGGDMVNL 176
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +2
Query: 38 PWIALIRRGSCNFELKVQNAWRANATAVLIYND-------RDAPDLDKMKLSTDNGRNIS 196
P L+ RG C F LKV NA +A A+AVL+ ++ D P+ D I
Sbjct: 93 PTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIP 152
Query: 197 AVFTYKWKGEEIARLIDNGTRVTI 268
+ K GE++ + I G V +
Sbjct: 153 SALVTKGFGEKLKKAISGGDMVNL 176
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +2
Query: 38 PWIALIRRGSCNFELKVQNAWRANATAVLIYND-------RDAPDLDKMKLSTDNGRNIS 196
P L+ RG C F LKV NA +A A+AVL+ ++ D P+ D I
Sbjct: 93 PTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIP 152
Query: 197 AVFTYKWKGEEIARLIDNGTRVTI 268
+ K GE++ + I G V +
Sbjct: 153 SALVTKGFGEKLKKAISGGDMVNL 176
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +2
Query: 38 PWIALIRRGSCNFELKVQNAWRANATAVLIYND-------RDAPDLDKMKLSTDNGRNIS 196
P L+ RG C F LKV NA +A A+AVL+ ++ D P+ D I
Sbjct: 93 PTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIP 152
Query: 197 AVFTYKWKGEEIARLIDNGTRVTI 268
+ K GE++ + I G V +
Sbjct: 153 SALVTKGFGEKLKKAISGGDMVNL 176
>At2g43070.1 68415.m05344 protease-associated (PA) domain-containing
protein contains protease associated (PA) domain,
Pfam:PF02225
Length = 540
Score = 39.1 bits (87), Expect = 0.001
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Frame = +2
Query: 44 IALIRRGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMK-LSTDNGRNIS--AVFTYK 214
IAL RG+C F K ++A A A+A+L+ ND++ DLD+M + D N+S + K
Sbjct: 108 IALSIRGNCAFTEKAKHAEAAGASALLVINDKE--DLDEMGCMEKDTSLNVSIPVLMISK 165
Query: 215 WKGEEIAR-LIDN 250
G+ + + ++DN
Sbjct: 166 SSGDALNKSMVDN 178
>At4g20110.1 68417.m02943 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222; identical to vacuolar sorting
receptor-like protein (GI:2827665) [Arabidopsis
thaliana]
Length = 625
Score = 35.9 bits (79), Expect = 0.014
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 20 EPLPQEPWIALIRRGSCNFELKVQNAWRANATAVLIYNDRDAP 148
+P P I L+ RG C F LK +A +A A AVL+ ++ D P
Sbjct: 85 KPKFPRPTILLLDRGGCYFALKAWHAQQAGAAAVLVADNVDEP 127
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 631
Score = 35.1 bits (77), Expect = 0.024
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 20 EPLPQEPWIALIRRGSCNFELKVQNAWRANATAVLIYNDRDAP 148
+P P I +I RG C F LKV N ++ AVL+ ++ D P
Sbjct: 84 KPKFPRPTILIIDRGECYFALKVWNGQQSGVAAVLVADNVDEP 126
>At2g34940.1 68415.m04289 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 618
Score = 34.7 bits (76), Expect = 0.032
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 38 PWIALIRRGSCNFELKVQNAWRANATAVLI 127
P I LI RG CNF LK+ N ++ A AVL+
Sbjct: 91 PKILLIDRGVCNFALKIWNGQQSGAAAVLL 120
>At4g09560.1 68417.m01571 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 431
Score = 34.3 bits (75), Expect = 0.042
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 38 PWIALIRRGSCNFELKVQNAWRANATAVLIYNDRD 142
P LI RG C+FE K++NA +A A ++Y+ D
Sbjct: 79 PPYVLIIRGGCSFEDKIRNAQKAGYKAAIVYDYED 113
>At1g05820.1 68414.m00609 protease-associated (PA) domain-containing
protein contains weak similarity to protease associated
(PA) domain proteins, Pfam:PF02225
Length = 441
Score = 33.5 bits (73), Expect = 0.074
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 44 IALIRRGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKL-STDNGRNIS 196
IAL RG C F +K Q A A A+++ ND++ +LD+M D N+S
Sbjct: 104 IALSVRGECAFTVKAQVAQAGGAAALVLINDKE--ELDEMVCGEKDTSLNVS 153
>At1g35630.1 68414.m04427 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 318
Score = 33.1 bits (72), Expect = 0.098
Identities = 30/118 (25%), Positives = 52/118 (44%)
Frame = +2
Query: 50 LIRRGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKLSTDNGRNISAVFTYKWKGEE 229
LI G C+FE KV+ A +A A ++YND +L +G +I + + GE
Sbjct: 81 LIVLGGCSFEEKVRKAQKAGYKAAIVYND-GYDELLVPMAGNSSGVDIHGLLVTRASGEV 139
Query: 230 IARLIDNGTRVTIAIIKGRSFAIIPKDFNKTSVLFVSISFIVLMVISLAWLVFYYIQR 403
+ D + + +I G F +S + I+FI L+ +S + ++R
Sbjct: 140 LKGYADQ-DEMKLWLIPG---------FGISSWSIMGITFISLLAMSAILATCFVVRR 187
>At5g47380.1 68418.m05839 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 618
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 392 YIQRFRYIHAKDRLSKRLCCAAKKAL 469
Y +FRY+ +KD + K+ C KKA+
Sbjct: 578 YSSKFRYVFSKDLMEKKPCETMKKAI 603
>At5g44120.3 68418.m05400 12S seed storage protein (CRA1) nearly
identical to SP|P15455 [Plant Mol Biol 11:805-820
(1988)]; contains Pfam profile PF00190 Cupin and Prosite
11-S plant seed storage proteins signature PS00305
Length = 472
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 59 RGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKLSTDNGRNI 193
RGS V W ANA A+L D +A ++++ DNG +
Sbjct: 333 RGSIRQNAMVLPQWNANANAILYVTDGEA----QIQIVNDNGNRV 373
>At5g44120.2 68418.m05399 12S seed storage protein (CRA1) nearly
identical to SP|P15455 [Plant Mol Biol 11:805-820
(1988)]; contains Pfam profile PF00190 Cupin and Prosite
11-S plant seed storage proteins signature PS00305
Length = 368
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 59 RGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKLSTDNGRNI 193
RGS V W ANA A+L D +A ++++ DNG +
Sbjct: 229 RGSIRQNAMVLPQWNANANAILYVTDGEA----QIQIVNDNGNRV 269
>At5g44120.1 68418.m05398 12S seed storage protein (CRA1) nearly
identical to SP|P15455 [Plant Mol Biol 11:805-820
(1988)]; contains Pfam profile PF00190 Cupin and Prosite
11-S plant seed storage proteins signature PS00305
Length = 285
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 59 RGSCNFELKVQNAWRANATAVLIYNDRDAPDLDKMKLSTDNGRNI 193
RGS V W ANA A+L D +A ++++ DNG +
Sbjct: 146 RGSIRQNAMVLPQWNANANAILYVTDGEA----QIQIVNDNGNRV 186
>At3g47120.1 68416.m05116 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 352
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 289 GPPFDYSDGDSGAVVNETRYLFSLPLVREHGT 194
G PFD ++GD AV ++ + + L+R+ GT
Sbjct: 42 GIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGT 73
>At3g14300.1 68416.m01809 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 968
Score = 27.5 bits (58), Expect = 4.8
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 429 LSLACIYRKRCM**--KTSHANDITMSTIKDIDTNSTDVLLKSLGMIAKDLPLIIAMVTL 256
LS A Y C+ + SH N +K NST+ SL ++AK L I
Sbjct: 185 LSAAVTYHGTCLDALDEISHTNSAIPLKLKSGMVNSTEFTSNSLAIVAKILSTISDFG-- 242
Query: 255 VPLSMRRAISSPFH 214
+P+ RR ++S H
Sbjct: 243 IPIHGRRLLNSSPH 256
>At4g25360.1 68417.m03649 expressed protein
Length = 533
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +2
Query: 125 IYNDRDAPDLDKMKLSTDNGRNISAVFTYKWKGEEIARLIDNGTRVTIAIIKGRSFAII 301
+Y + P L +M+ NGR ++WK + L R + ++KG++ A I
Sbjct: 190 LYTNNSCPVLTQMQNCQGNGRPDKGYENWRWKPSQ-CELPRFDARKFLELMKGKTLAFI 247
>At5g01360.1 68418.m00049 expressed protein several hypothetical
proteins - Arabidopsis thaliana
Length = 434
Score = 26.6 bits (56), Expect = 8.5
Identities = 10/44 (22%), Positives = 22/44 (50%)
Frame = +2
Query: 98 WRANATAVLIYNDRDAPDLDKMKLSTDNGRNISAVFTYKWKGEE 229
W N++ +Y DR P +D+ NG+ + ++W+ ++
Sbjct: 99 WVYNSSIEPLYTDRSCPYIDRQFSCMKNGQPETDYLRWEWQPDD 142
>At4g36080.1 68417.m05136 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
contains Pfam profiles PF00454: Phosphatidylinositol 3-
and 4-kinase, PF02259: FAT domain, PF02260: FATC domain
Length = 3839
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +2
Query: 338 SISFIVLMVISLAWLVFYYIQRFRYIHAKDRLSKRLCCAA 457
S+SF+++++ +LA + +++ + +H RLS+ L AA
Sbjct: 2264 SVSFVLVVLKTLAEVQKHFLDPYVLVHILQRLSRDLGLAA 2303
>At4g18810.1 68417.m02777 expressed protein similar to UV-B and
ozone similarly regulated protein 1 UOS1 [Pisum sativum]
GI:20339364
Length = 596
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 134 DRDAPDLDKMKLSTDNGRNISAVFTYKWKGEEIARLIDNGTRVTIAIIK 280
+R DL K + + + + TYK KGE++ R D+G + AI++
Sbjct: 455 ERPGLDLSKQPPAVRLNKELDFILTYKLKGEDLIR--DSG--IPFAIVR 499
>At1g67530.1 68414.m07694 armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein
contains Pfam domain, PF00514:
Armadillo/beta-catenin-like repeats and Pfam, PF04564:
U-box domain
Length = 782
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = +2
Query: 140 DAPDLDKMKLSTDNG-----RNISAVFTYKWKGEEIARLIDNGTRV 262
++ DLD +L+ + ++++++ +YK KG +I L +NGT V
Sbjct: 352 ESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVPLEENGTTV 397
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,128,542
Number of Sequences: 28952
Number of extensions: 200072
Number of successful extensions: 568
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 801831960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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