BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0210
(580 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0042 + 473912-474058,474208-474349,474442-476264 298 2e-81
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 297 5e-81
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 297 5e-81
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 294 4e-80
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 281 2e-76
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116... 212 1e-55
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 182 2e-46
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 180 6e-46
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 170 6e-43
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 170 6e-43
04_03_0846 - 20249085-20249192,20249418-20249501,20249687-202498... 31 0.88
02_05_0587 + 30162806-30163183,30163315-30163478,30163571-301636... 29 2.7
04_01_0255 - 3395548-3396129,3396203-3397834 29 3.5
06_03_1058 + 27254195-27254382,27255041-27255116,27255254-272554... 28 4.7
09_06_0225 - 21670861-21670887,21671340-21672021,21672041-21672852 28 6.2
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 28 6.2
03_02_0901 + 12267042-12267182,12267949-12268095,12268163-122682... 27 8.2
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 298 bits (731), Expect = 2e-81
Identities = 133/170 (78%), Positives = 156/170 (91%)
Frame = +3
Query: 69 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 248
+NK KPIW R ++I+++EY FYKSLTNDWEDHLAVKHFSVEGQLEF+A+LFVPRRAPF
Sbjct: 268 INKQKPIWLRKPEEISREEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPF 327
Query: 249 DLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 428
DLF+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L F++GVVDS+DLPLNISREMLQQNKIL
Sbjct: 328 DLFDTRKKMNNIKLYVRRVFIMDNCEELIPEWLGFVKGVVDSDDLPLNISREMLQQNKIL 387
Query: 429 KVIRKNLVKKCL*LFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKL 578
KVIRKNLVKKC+ +F E+A++KE+Y K+YE FSKNLKLGIHEDSQNR KL
Sbjct: 388 KVIRKNLVKKCIEMFFEIADNKEDYAKFYEAFSKNLKLGIHEDSQNRGKL 437
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 297 bits (728), Expect = 5e-81
Identities = 132/170 (77%), Positives = 157/170 (92%)
Frame = +3
Query: 69 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 248
+NK KPIW R ++IT++EY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 MNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPF 322
Query: 249 DLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 428
DLF+ +K++NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLPLNISREMLQQNKIL
Sbjct: 323 DLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKIL 382
Query: 429 KVIRKNLVKKCL*LFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKL 578
KVIRKNLVKKC+ LF E+AE+KE+Y K+YE FSKNLKLGIHEDS NR K+
Sbjct: 383 KVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKI 432
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 297 bits (728), Expect = 5e-81
Identities = 132/170 (77%), Positives = 157/170 (92%)
Frame = +3
Query: 69 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 248
+NK KPIW R ++IT++EY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 MNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPF 322
Query: 249 DLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 428
DLF+ +K++NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLPLNISREMLQQNKIL
Sbjct: 323 DLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKIL 382
Query: 429 KVIRKNLVKKCL*LFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKL 578
KVIRKNLVKKC+ LF E+AE+KE+Y K+YE FSKNLKLGIHEDS NR K+
Sbjct: 383 KVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKI 432
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 294 bits (721), Expect = 4e-80
Identities = 132/170 (77%), Positives = 156/170 (91%)
Frame = +3
Query: 69 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 248
+NK KPIW R ++IT++EY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPF 322
Query: 249 DLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 428
DLF+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLPLNISREMLQQNKIL
Sbjct: 323 DLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKIL 382
Query: 429 KVIRKNLVKKCL*LFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKL 578
KVIRKNLVKKC+ LF E+AE+KE+Y K+YE FSKNLKLGIHEDS NR K+
Sbjct: 383 KVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRNKI 432
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 281 bits (690), Expect = 2e-76
Identities = 126/161 (78%), Positives = 150/161 (93%)
Frame = +3
Query: 96 RNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENKKRK 275
R ++IT++EY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ +K++
Sbjct: 18 RKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQ 77
Query: 276 NNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKILKVIRKNLVK 455
NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLPLNISREMLQQNKILKVIRKNLVK
Sbjct: 78 NNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVK 137
Query: 456 KCL*LFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKL 578
KC+ LF E+AE+KE+Y K+YE FSKNLKLGIHEDS NR K+
Sbjct: 138 KCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKI 178
>09_06_0076 +
20710482-20710670,20711313-20711547,20711664-20711689,
20712000-20712293,20712603-20712728,20712827-20712896,
20712992-20713182,20713394-20713519,20713878-20714279,
20714364-20714758,20714861-20715315,20715403-20715524,
20715653-20715693,20716026-20716129,20716363-20716576,
20717667-20717780,20718576-20718612
Length = 1046
Score = 212 bits (518), Expect = 1e-55
Identities = 97/128 (75%), Positives = 116/128 (90%)
Frame = +3
Query: 195 EGQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDS 374
EGQLEF+A+LFVP+ APFD+F+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L+F+ GVVD
Sbjct: 553 EGQLEFKAILFVPKGAPFDIFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVEGVVDY 612
Query: 375 EDLPLNISREMLQQNKILKVIRKNLVKKCL*LFEELAEDKENYKKYYEQFSKNLKLGIHE 554
EDLPLNIS E+LQQNKILKVIRKNLVKKC+ LF E+AE+KE+Y K+Y+ FSKNLKLGIHE
Sbjct: 613 EDLPLNISFELLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYKAFSKNLKLGIHE 672
Query: 555 DSQNRAKL 578
DS NR K+
Sbjct: 673 DSTNRTKI 680
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 182 bits (442), Expect = 2e-46
Identities = 87/174 (50%), Positives = 128/174 (73%), Gaps = 5/174 (2%)
Frame = +3
Query: 72 NKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFD 251
N+TKPIW RN ++ + EY +FYK N++ D LA HF+ EG++EFR++L++P AP
Sbjct: 347 NETKPIWMRNPKEVEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMAPLS 406
Query: 252 LFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDSEDLPLNISREMLQQNK 422
E N K KN I+LYV+RVFI D+ + +L P YL+F++GVVDS DLPLN+SRE+LQ+++
Sbjct: 407 NEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESR 465
Query: 423 ILKVIRKNLVKKCL*LFEELA--EDKENYKKYYEQFSKNLKLGIHEDSQNRAKL 578
I++++RK LV+K + +E+A EDKE+YKK++E F K +KLG ED+ N +L
Sbjct: 466 IVRIMRKRLVRKTFDMIQEIAEKEDKEDYKKFWESFGKFVKLGCIEDTGNHKRL 519
>08_02_1073 - 24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 180 bits (439), Expect = 6e-46
Identities = 87/174 (50%), Positives = 128/174 (73%), Gaps = 5/174 (2%)
Frame = +3
Query: 72 NKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFD 251
N+TKPIW R+ +I + EY +FYK N++ D LA HF+ EG++EFR++L++P AP
Sbjct: 597 NETKPIWMRSPKEIEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMAPLS 656
Query: 252 LFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDSEDLPLNISREMLQQNK 422
E N K KN I+LYV+RVFI D+ + +L P YL+F++GVVDS DLPLN+SRE+LQ+++
Sbjct: 657 NEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESR 715
Query: 423 ILKVIRKNLVKKCL*LFEELAE--DKENYKKYYEQFSKNLKLGIHEDSQNRAKL 578
I++++RK LV+K + EE++E DKE+YKK++E F K +KLG ED+ N +L
Sbjct: 716 IVRIMRKRLVRKTFDMIEEISEKDDKEDYKKFWESFGKFIKLGCIEDTGNHKRL 769
>12_02_0522 - 19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 170 bits (414), Expect = 6e-43
Identities = 77/172 (44%), Positives = 126/172 (73%), Gaps = 3/172 (1%)
Frame = +3
Query: 72 NKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFD 251
N+T+PIW RN +++ +EY +FYK N++ D LA HF+ EG++EFR++L+VP D
Sbjct: 610 NETQPIWLRNPREVSTEEYNEFYKKTFNEYMDPLASSHFTTEGEVEFRSILYVPATKKED 669
Query: 252 LFENKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 428
+ + K + NI+LYV+RVFI D+ + +L P YL+F+RGVVDS DLPLN+SRE+LQ+++I+
Sbjct: 670 ITDRKTK--NIRLYVKRVFISDDFDGELFPRYLSFVRGVVDSNDLPLNVSREILQESRIV 727
Query: 429 KVIRKNLVKKC--L*LFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKL 578
+++RK LV+K + L +E++++Y++++E + K LKLG ED +N ++
Sbjct: 728 RIMRKRLVRKAFDMILGISCSENRDDYERFWENYGKFLKLGCMEDKENHKRI 779
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 170 bits (414), Expect = 6e-43
Identities = 89/195 (45%), Positives = 128/195 (65%), Gaps = 25/195 (12%)
Frame = +3
Query: 69 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDH--LAVKHFSVEGQLEFRALLFVPRRA 242
LN K IW R+ ++T++EY FY SL D+ D L+ HF+ EG +EF+ALLFVP +A
Sbjct: 369 LNDVKAIWLRSPKEVTEEEYTKFYHSLAKDFGDDKPLSWSHFTAEGDVEFKALLFVPPKA 428
Query: 243 PFDLFEN--KKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQ 416
P DL+E+ K+N+KLYVRRVFI D ++L+P+YL+F++G+VDS+ LPLN+SREMLQQ
Sbjct: 429 PHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLKGLVDSDTLPLNVSREMLQQ 488
Query: 417 NKILKVIRKNLVKKCL*LFEELAED---------------------KENYKKYYEQFSKN 533
+ LK I+K L++K L + +LAE+ K Y K++ +F K+
Sbjct: 489 HSSLKTIKKKLIRKALDMIRKLAEEDPDEYSNKDKTDEEKSAMEEKKGQYAKFWNEFGKS 548
Query: 534 LKLGIHEDSQNRAKL 578
+KLGI ED+ NR +L
Sbjct: 549 VKLGIIEDATNRNRL 563
>04_03_0846 -
20249085-20249192,20249418-20249501,20249687-20249803,
20249899-20249979,20250563-20250622,20250762-20250804,
20250899-20250997,20251260-20251531,20251765-20251886,
20252376-20252517
Length = 375
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 90 WTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFS 191
W NAD +T++EYG + SL N+ + A+ H S
Sbjct: 237 WNPNADTMTRNEYGVWEISLPNNADGSPAIPHGS 270
>02_05_0587 +
30162806-30163183,30163315-30163478,30163571-30163654,
30163737-30163794,30164092-30164145,30164244-30164309,
30164310-30164381,30164547-30164627,30165361-30165533,
30165916-30166018,30166148-30166279,30166432-30166554,
30166898-30167002,30167397-30167722,30167919-30168258,
30169973-30170113,30170589-30170801,30170901-30171119,
30171272-30171619,30171711-30172043,30172548-30172601
Length = 1188
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 306 FIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKILKVIRKNL 449
FI+D CE I +Y F+ G S L L+ + + + +LK + ++L
Sbjct: 438 FILDCCESNIAKYTKFLEG--SSGSLQLSTNSKQANRTLLLKQLARDL 483
>04_01_0255 - 3395548-3396129,3396203-3397834
Length = 737
Score = 28.7 bits (61), Expect = 3.5
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 339 EYLNFIRGVVDSEDLPLNISREMLQQNKILKVIRKNLVKKCL*LFEELA---EDKENYKK 509
+YL+++ V SED+ + L+ I +KNL+ C+ + LA ED E KK
Sbjct: 406 DYLSYVVEKVASEDISMEYEYHNLRGIHISVDFKKNLL-DCIWDYMYLAYPVEDVEEKKK 464
Query: 510 YYEQFSKNLKLGIHE 554
E+ K K G E
Sbjct: 465 EKEEKKKKKKKGTAE 479
>06_03_1058 +
27254195-27254382,27255041-27255116,27255254-27255418,
27255580-27255671,27255713-27255754,27256342-27256387,
27258456-27258683
Length = 278
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Frame = +1
Query: 25 RRRKQLKKNTQRMKNSTRRSLSGPETLMTLPKMSMETSTNPLPMIGRTILQSNTSPLKVS 204
R R ++ + ++ T LS T+ L ++ ++ ++ L + + + L+
Sbjct: 96 RLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESS-LSKVHARKDELMSQQLEDM 154
Query: 205 *SSVHYFLCHVVHLL---TCLKTRSARTISSCMYEEFSSWTTVRISSQ 339
VHY L V ++ C++ +RTIS + E W+++ + Q
Sbjct: 155 RRMVHYSLIVVAVVVFADECIRPCMSRTISCAAWGELQLWSSLPVGEQ 202
>09_06_0225 - 21670861-21670887,21671340-21672021,21672041-21672852
Length = 506
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 324 EDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKILKVIRKNLVKKCL*LFEELAEDKENY 503
+D+ Y+ +VD D+P + Q+ K+ IR + F L DKE Y
Sbjct: 439 QDMEERYIQDFMNIVDKLDVPEYFQQAYFQKFKVPDDIRLRYINDIEEEFRMLG-DKEGY 497
Query: 504 KKY 512
K Y
Sbjct: 498 KFY 500
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 471 FEELAEDKENYKKYYEQFSKNLKL 542
+ AEDKE YK+ +++++ LKL
Sbjct: 276 YRHSAEDKERYKREMQEYNERLKL 299
>03_02_0901 +
12267042-12267182,12267949-12268095,12268163-12268253,
12268367-12268485,12268779-12268969,12269440-12269650,
12270072-12270309,12270944-12271329,12271933-12271956,
12271984-12272077,12272341-12272525,12273025-12273255,
12273665-12273730,12273816-12274034,12274764-12275003,
12275244-12275423,12276269-12276535,12276612-12276815,
12276896-12277048
Length = 1128
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 105 DDITQDEYGDFYKSLTNDWEDHLAVK 182
DD+ ++Y F+K+ DW D +K
Sbjct: 619 DDMDAEDYSKFFKTELRDWSDEDLIK 644
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,506,329
Number of Sequences: 37544
Number of extensions: 249605
Number of successful extensions: 770
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -