BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0210
(580 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein. 24 3.1
AJ010904-1|CAA09390.1| 142|Anopheles gambiae nitric oxide synth... 23 5.4
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 23 5.4
AY330180-1|AAQ16286.1| 176|Anopheles gambiae odorant-binding pr... 23 9.5
AJ618924-1|CAF02003.1| 144|Anopheles gambiae odorant-binding pr... 23 9.5
AF071161-1|AAC79997.1| 218|Anopheles gambiae glutathione S-tran... 23 9.5
>CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein.
Length = 295
Score = 24.2 bits (50), Expect = 3.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 475 KNWQRTKKTTRSIMNNSART*NWVSMK 555
+NW+ +K+T +I AR W S K
Sbjct: 269 RNWEESKETETNINPTDARAPAWESDK 295
>AJ010904-1|CAA09390.1| 142|Anopheles gambiae nitric oxide synthase
protein.
Length = 142
Score = 23.4 bits (48), Expect = 5.4
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 159 WEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIP 338
W++ +K V+ ++ L F R DL+ ++K + K + RVF+ + E+ IP
Sbjct: 7 WQEWDHIKSEMVDCKIPKVWLFFGCRTKNVDLYRDEKEEMVQKGVLDRVFLALSREENIP 66
Query: 339 E 341
+
Sbjct: 67 K 67
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 23.4 bits (48), Expect = 5.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 486 EDKENYKKYYEQFSKNLKLGIHED 557
ED+E +K+ QFSK + LGI D
Sbjct: 214 EDEEAFKR---QFSKYISLGIKAD 234
>AY330180-1|AAQ16286.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP54 protein.
Length = 176
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +3
Query: 75 KTKPIWTRNADDITQDEYGDFYKSLTNDWE 164
K K + N DD+ + + ++ L DW+
Sbjct: 77 KLKSLGLLNGDDLVEAKVQEYIDRLEGDWK 106
>AJ618924-1|CAF02003.1| 144|Anopheles gambiae odorant-binding
protein OBP5470 protein.
Length = 144
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +3
Query: 75 KTKPIWTRNADDITQDEYGDFYKSLTNDWE 164
K K + N DD+ + + ++ L DW+
Sbjct: 40 KLKSLGLLNGDDLVEAKVQEYIDRLEGDWK 69
>AF071161-1|AAC79997.1| 218|Anopheles gambiae glutathione
S-transferase D7 protein.
Length = 218
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +3
Query: 501 YKKYYEQFSKNLKLGIHEDSQNRAKL 578
Y++ + + ++LG H D +AKL
Sbjct: 107 YQRVVDYYFPTIQLGAHLDQTKKAKL 132
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,845
Number of Sequences: 2352
Number of extensions: 9580
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -