Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0208
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   3.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   4.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   4.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.4  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 175 PKVIPTV-LKESTNSPKIFILLTQISVREHTNPLLS 71
           P+  P V + E  N+P+I  L++ +   +  +P+LS
Sbjct: 44  PREQPIVAMFEVNNTPEILQLMSDLKQHQSDDPVLS 79


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/49 (22%), Positives = 21/49 (42%)
 Frame = -2

Query: 449 LSPVACSEFNTTCDVGCQTQFVVMSGHKYPVFRHYQIRFDVISSHGYTE 303
           +SP + S  N+     CQ  +    G    V +    ++D  SS+ + +
Sbjct: 160 MSPQSTSSNNSASPKACQFLYNQFPGSSQVVVKDETCQYDTESSYQFND 208


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/49 (22%), Positives = 21/49 (42%)
 Frame = -2

Query: 449 LSPVACSEFNTTCDVGCQTQFVVMSGHKYPVFRHYQIRFDVISSHGYTE 303
           +SP + S  N+     CQ  +    G    V +    ++D  SS+ + +
Sbjct: 180 MSPQSTSSNNSASPKACQFLYNQFPGSSQVVVKDETCQYDTESSYQFND 228


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/36 (25%), Positives = 14/36 (38%)
 Frame = -2

Query: 191 LIYWNSKSDPHGAKGKHQQPEDFHIANPNIRERTHK 84
           + +W       G K +    +  H   P I+ER  K
Sbjct: 459 ICFWYVPKSLRGRKDEADYKDKLHKVAPRIKERMMK 494


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,886
Number of Sequences: 336
Number of extensions: 3386
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)