Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0207
         (427 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CD8CF Cluster: hypothetical protein TTHERM_0052...    33   2.5  
UniRef50_A0KZL1 Cluster: Permease YjgP/YjgQ family protein; n=15...    31   7.5  
UniRef50_A7NX39 Cluster: Chromosome chr5 scaffold_2, whole genom...    31   9.9  
UniRef50_O77393 Cluster: Putative uncharacterized protein MAL3P6...    31   9.9  

>UniRef50_UPI00006CD8CF Cluster: hypothetical protein
           TTHERM_00522570; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00522570 - Tetrahymena
           thermophila SB210
          Length = 392

 Score = 33.1 bits (72), Expect = 2.5
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -1

Query: 388 YLTIVIK*LRFYHSVSIIFNLYYVVKSFYYYAVLTT 281
           Y++IV+   + YH+ ++IF LY  +KS YY  V  T
Sbjct: 84  YVSIVVTFYQKYHNSTVIFPLYTPIKSDYYTYVTAT 119


>UniRef50_A0KZL1 Cluster: Permease YjgP/YjgQ family protein; n=15;
           Alteromonadales|Rep: Permease YjgP/YjgQ family protein -
           Shewanella sp. (strain ANA-3)
          Length = 370

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 87  YIIR*VFKKQVQIMFTTLT*TIFQHFMKFNVYTNNRQ-PNKLIQKSLG 227
           Y+IR V K Q+ ++F  LT  I QHF++     ++ + P  LI   +G
Sbjct: 6   YLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIG 53


>UniRef50_A7NX39 Cluster: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr5 scaffold_2, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 799

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 382 TIVIK*LRFYHSVSIIFNLYYVVKSFYYYA 293
           TI+ +   F+HS++++  LYY   SFY YA
Sbjct: 47  TIINRSHAFFHSMALLALLYYRASSFYLYA 76


>UniRef50_O77393 Cluster: Putative uncharacterized protein MAL3P6.2;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL3P6.2 - Plasmodium falciparum
            (isolate 3D7)
          Length = 2423

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 102  VFKKQVQIMFTTLT*TIFQHFMKFNVYTNNRQPNKLIQ 215
            +F   V I+   L  TI +H +K N   NN+Q NK++Q
Sbjct: 1628 LFSSYVNILNDCLHRTIRKHIIKNNFIYNNKQNNKIVQ 1665


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,049,974
Number of Sequences: 1657284
Number of extensions: 5503567
Number of successful extensions: 9502
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9497
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)