Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0207
         (427 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80023-5|AAG24040.1|  315|Caenorhabditis elegans Serpentine rece...    29   1.1  
U28971-3|AAK68670.1|  319|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AF016442-3|AAB65917.2|  597|Caenorhabditis elegans Hypothetical ...    27   5.6  
Z72518-1|CAA96699.2|  395|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z78019-6|CAB01453.2|  370|Caenorhabditis elegans Hypothetical pr...    26   9.8  
Z77134-5|CAE17935.1|   94|Caenorhabditis elegans Hypothetical pr...    26   9.8  
U23179-6|AAK68205.1|  341|Caenorhabditis elegans Serpentine rece...    26   9.8  

>U80023-5|AAG24040.1|  315|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 31 protein.
          Length = 315

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -1

Query: 154 KIVYVSVVNIICTCFLNTYLII*IF*QSKQNYCAYISE 41
           KIVY S + +I   F+  +L+I  +   K+  C+Y ++
Sbjct: 167 KIVYWSAITLITQLFITAFLVIVAYIWIKETLCSYATK 204


>U28971-3|AAK68670.1|  319|Caenorhabditis elegans Hypothetical
           protein B0244.7 protein.
          Length = 319

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 8/28 (28%), Positives = 21/28 (75%)
 Frame = -3

Query: 344 IYNLQLILRC*VFLLLRCTNYALIFINL 261
           +YN++++LR  +F++  C ++  +F+N+
Sbjct: 39  VYNIEMLLRWAIFIIPCCMSFFALFLNI 66


>AF016442-3|AAB65917.2|  597|Caenorhabditis elegans Hypothetical
           protein K12B6.2 protein.
          Length = 597

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 150 IFQHFMKFNVYTNNRQPNKLIQKSLGDITFQKNFV 254
           IFQ F  + VYT  R    +I+K   D+ F  +FV
Sbjct: 375 IFQAFFIYFVYTIFRDSVGMIRKYQEDVAFSNSFV 409


>Z72518-1|CAA96699.2|  395|Caenorhabditis elegans Hypothetical
           protein ZC374.1 protein.
          Length = 395

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -1

Query: 358 FYHSVSIIFNLYYVVKSFYYYAVLTTL*FL*I*VTTK 248
           F   V I FNL++V+ SFY   ++  + +L I V+ +
Sbjct: 178 FNDDVLIAFNLFHVITSFYIPLLIVIICYLAIGVSIR 214


>Z78019-6|CAB01453.2|  370|Caenorhabditis elegans Hypothetical
           protein ZK863.1 protein.
          Length = 370

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 84  YFDSQSKIIVLIYRRINHIIP 22
           YF S SKIIVL+   I   IP
Sbjct: 176 YFSSSSKIIVLVESTITFFIP 196


>Z77134-5|CAE17935.1|   94|Caenorhabditis elegans Hypothetical
           protein R09H10.7 protein.
          Length = 94

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 218 FLY*LIRLSVI-GINVKFHKMLEDSLRKC 135
           FL   I +SVI GIN+K  + LED L  C
Sbjct: 46  FLITTIIVSVILGINIKTEQNLEDQLEAC 74


>U23179-6|AAK68205.1|  341|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 1 protein.
          Length = 341

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 160 CWKIVYVSVVNIICTCFL 107
           CW ++Y  + N++C C +
Sbjct: 188 CWILLYAELGNLLCNCII 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,051,894
Number of Sequences: 27780
Number of extensions: 140894
Number of successful extensions: 228
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)