Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0205
         (346 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   0.38 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   0.38 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   6.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   8.2  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 0.38
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 4/28 (14%)
 Frame = +3

Query: 213 TDPRPVHPLRV--VRSAHGE--NFILNS 284
           TD  PVHP+RV  + S  GE  +F++N+
Sbjct: 372 TDGEPVHPVRVNTIISFSGERYDFVINA 399



 Score = 20.6 bits (41), Expect = 4.7
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -1

Query: 271 KFSPCADRTTLSGCTGRGSVTVELLKTP 188
           +FS    R        R S T ELLK P
Sbjct: 73  RFSSGVGRKAWKHLDFRNSATAELLKNP 100


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.2 bits (50), Expect = 0.38
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 4/28 (14%)
 Frame = +3

Query: 213 TDPRPVHPLRV--VRSAHGE--NFILNS 284
           TD  PVHP+RV  + S  GE  +F++N+
Sbjct: 372 TDGEPVHPVRVNTIISFSGERYDFVINA 399



 Score = 20.6 bits (41), Expect = 4.7
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -1

Query: 271 KFSPCADRTTLSGCTGRGSVTVELLKTP 188
           +FS    R        R S T ELLK P
Sbjct: 73  RFSSGVGRKAWKHLDFRNSATAELLKNP 100


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 75  LFAKVQLCHRLYEASKTE 128
           +F    LC RL+EAS+ E
Sbjct: 234 VFRPEPLCERLFEASREE 251


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 247 CDRHTVKIS 273
           C+ HTVK+S
Sbjct: 626 CENHTVKVS 634


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 314 LIRFTLKPTVRVKNEIFTVCRSHDS*RMYW 225
           L+   LK TV V +  FT+ R   +   YW
Sbjct: 571 LVDAPLKDTVTVPDGGFTIIRFKATNPGYW 600


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,200
Number of Sequences: 336
Number of extensions: 1521
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)