BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0205 (346 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 23 3.2 EF519365-1|ABP68474.1| 486|Anopheles gambiae LRIM1 protein. 22 5.6 EF519364-1|ABP68473.1| 496|Anopheles gambiae LRIM1 protein. 22 5.6 AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 22 7.4 AF378002-1|AAL16724.1| 336|Anopheles gambiae putative transposa... 22 7.4 EF519382-1|ABP68491.1| 493|Anopheles gambiae LRIM1 protein. 21 9.7 AY344814-1|AAR03842.1| 286|Anopheles gambiae LRR Toll protein. 21 9.7 >AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal growth factor receptorprotein. Length = 1433 Score = 23.0 bits (47), Expect = 3.2 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = +1 Query: 106 CTKLRKLNLTPTCIKIDCF 162 C + KLN +P C + CF Sbjct: 176 CQRFSKLNCSPQCSQGRCF 194 >EF519365-1|ABP68474.1| 486|Anopheles gambiae LRIM1 protein. Length = 486 Score = 22.2 bits (45), Expect = 5.6 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -2 Query: 153 YFYASWGQVQFSKLRTND 100 + Y GQV F+KL+T D Sbjct: 202 FIYDXXGQVVFAKLKTLD 219 >EF519364-1|ABP68473.1| 496|Anopheles gambiae LRIM1 protein. Length = 496 Score = 22.2 bits (45), Expect = 5.6 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -2 Query: 153 YFYASWGQVQFSKLRTND 100 + Y GQV F+KL+T D Sbjct: 202 FIYDXXGQVVFAKLKTLD 219 >AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein protein. Length = 257 Score = 21.8 bits (44), Expect = 7.4 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Frame = +3 Query: 90 QLCHRLYEASKTELDPNLHKNRL-FLI 167 Q C+ A+K + N H NR FLI Sbjct: 156 QFCNAEIRAAKADSPENCHSNRAEFLI 182 >AF378002-1|AAL16724.1| 336|Anopheles gambiae putative transposase protein. Length = 336 Score = 21.8 bits (44), Expect = 7.4 Identities = 8/25 (32%), Positives = 13/25 (52%) Frame = -3 Query: 281 VKNEIFTVCRSHDS*RMYWSRISYC 207 ++ I RSHD M+W ++ C Sbjct: 219 LQKRILPFIRSHDHPVMFWPDLASC 243 >EF519382-1|ABP68491.1| 493|Anopheles gambiae LRIM1 protein. Length = 493 Score = 21.4 bits (43), Expect = 9.7 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -2 Query: 153 YFYASWGQVQFSKLRTND 100 + Y GQV F+KL+T D Sbjct: 202 FIYDIQGQVVFAKLKTLD 219 >AY344814-1|AAR03842.1| 286|Anopheles gambiae LRR Toll protein. Length = 286 Score = 21.4 bits (43), Expect = 9.7 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -2 Query: 153 YFYASWGQVQFSKLRTND 100 + Y GQV F+KL+T D Sbjct: 127 FMYDIQGQVVFAKLKTLD 144 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 340,068 Number of Sequences: 2352 Number of extensions: 6279 Number of successful extensions: 51 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 51 length of database: 563,979 effective HSP length: 57 effective length of database: 429,915 effective search space used: 24505155 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -