Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0201
         (591 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    43   0.006
UniRef50_Q8XNJ0 Cluster: ATP-dependent DNA helicase; n=9; Clostr...    32   8.7  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 42.7 bits (96), Expect = 0.006
 Identities = 21/28 (75%), Positives = 22/28 (78%)
 Frame = +2

Query: 242 SRF*STRRFCEVLALIGLVLANFLRLSP 325
           SRF S  RFCE L L+GLVLAN LRLSP
Sbjct: 85  SRFRSDGRFCEALLLLGLVLANSLRLSP 112


>UniRef50_Q8XNJ0 Cluster: ATP-dependent DNA helicase; n=9;
           Clostridiales|Rep: ATP-dependent DNA helicase -
           Clostridium perfringens
          Length = 724

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +1

Query: 382 KVGRKKSFHITLE*IEEDKKFHI*PSPRHSPIRTV 486
           K G+KKSF IT++ + E  KFH     R   I TV
Sbjct: 615 KDGKKKSFEITIDMLREGDKFHTIAKERELSITTV 649


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,796,412
Number of Sequences: 1657284
Number of extensions: 10183031
Number of successful extensions: 17772
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17772
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)