Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0200
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1782.03 |||microfibrillar-associated protein family protein|... 33 0.028
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 31 0.15
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 29 0.34
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 29 0.60
SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces po... 28 0.80
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 27 1.4
SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination ... 27 1.8
SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces po... 27 1.8
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 27 1.8
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 1.8
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.2
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 26 3.2
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 26 3.2
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 26 3.2
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 26 3.2
SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces pom... 25 5.6
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 25 5.6
SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyc... 25 5.6
SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 7.4
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 25 7.4
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 33.1 bits (72), Expect = 0.028
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 382 KQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEEFLQQY 552
K+ + E ELE+E++A+ ++ ++ +E EAQD K E + +FLQ+Y
Sbjct: 205 KKRDKEKSLELEREKMAIEERRLMN--SEEREAQDLKDAEASRRGKKKSSMQFLQKY 259
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 30.7 bits (66), Expect = 0.15
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +1
Query: 289 IKNAELPPINSWNGSATNTGPKGVI--EDWRRFKQLEAENRAE--LEKERIALSKKLTLS 456
+K + + + + +GS + +G I D R +Q EA+ ++E +EK+ ++LS + T+S
Sbjct: 399 LKLSPIKVVKAPDGSLSRAAMQGQILANDRREIRQKEAKLKSEQEMEKQDLSLSWQDTMS 458
Query: 457 VKTEREEAQD 486
+R+ AQD
Sbjct: 459 NPQDRKFAQD 468
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 319 SWNGSATNTGPKGVIEDWR--RFKQLEAEN---RAELEKERIALSKKLTLSVKTERE 474
SW + +N + +D R +QL +E R I+ K+ TLS+K +RE
Sbjct: 452 SWQDTMSNPQDRKFAQDVRDSAARQLTSETPSWRQATRNANISYGKRTTLSMKEQRE 508
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 436 SKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
+K+ T++VK+ +E K+E I E NE+ID++
Sbjct: 72 AKQATVNVKSYYDEHAKPKVENIRYEVNEVIDKK 105
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 28.7 bits (61), Expect = 0.60
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 241 HHQTRHLRCYCSNCVLSLLESCHPKSSF 158
HH+ + +R Y C++ LL C P + F
Sbjct: 61 HHKDKGIRSYTLCCIVELLRLCAPDAPF 88
>SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 28.3 bits (60), Expect = 0.80
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +1
Query: 352 KGVIEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELID 531
KG + ++ ++E EN ++ E +KK + ++ R+E + +K E D+ ++ +
Sbjct: 272 KGDVPNFEDISKMEKENNLDIMIEASGFNKKQSKELEKYRQEEEKRK--ENGDDLSDNYE 329
Query: 532 EE 537
EE
Sbjct: 330 EE 331
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 385 QLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELI-DEEFLQQ 549
++E E+ +E + + +S ++ EEA+ KK+EE +E +++ DEE +++
Sbjct: 38 EIEKEDEEYNIEEEEEAERDIEISSESSDEEAELKKLEEEGEEVEKILRDEERIKK 93
>SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination
repair protein Sfr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 358 VIEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEF 516
+I+ W+ Q AE + ERI L+ +T S + E E + +I+E+ EF
Sbjct: 221 LIQKWKNAAQQAAEVLFKPMAERIRLAGGVTQSFRIEEGENKG-QIQEVRTEF 272
>SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 277 PNKEIKNAELPPINSWNGSATNTG 348
P +E+ +AE+P INSW ++N+G
Sbjct: 52 PIREM-DAEIPAINSWKKDSSNSG 74
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +1
Query: 316 NSWNGSATNTGPKGVIEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKI 495
N+W G + V++ W++ K+L A+ E +KK+ + R++ Q +K
Sbjct: 52 NTWEPEQNLFGAEKVLKKWKKRKKLIAKGLLEPFDAEDNEAKKMKREKEILRQQRQKRKS 111
Query: 496 E 498
E
Sbjct: 112 E 112
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 358 VIEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIE 498
++ED R+ Q + E + L R L +++LSV++ + ++KKI+
Sbjct: 573 LVEDVRKKLQEKEEAESSLRSVRERLEIRISLSVQSINDLTENKKIK 619
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +1
Query: 385 QLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNEL 525
+ E +R+ +E+ L K++ + E +DKKI+E+++ N+L
Sbjct: 133 ETEVTSRSTSSQEKDELEKQV--KTLHDLNEQKDKKIKELKERINDL 177
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1207
Score = 26.2 bits (55), Expect = 3.2
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 280 NKEIKNAELPPINSWNGSATNTGPKGVIEDWRRFKQLEAENRAELEKERIALSKKLT-LS 456
NK + +LP + GSA T P V E + L + + EK +L +++ L+
Sbjct: 786 NKTEEEIKLPSL----GSAFTT-PVPVNETYTHNWPLLDTSHSTFEK---SLQERMEQLA 837
Query: 457 VKTEREEAQDKKIEEIEDEFNELIDE 534
++ + E+ +++ EE+E +++DE
Sbjct: 838 IERQEEQESEEEYEEVEQSLMDVVDE 863
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 361 IEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
I+ W +K + E+E RI SK+ + +RE + K I E+EF E DE+
Sbjct: 471 IKPWESYKYVR-----EIESHRIHFSKE-----EEKREREKSKGIRGQEEEFIENADED 519
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 26.2 bits (55), Expect = 3.2
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 391 EAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
E E + E E A + L+ + E EE +D++ + ED F + D E
Sbjct: 373 EDEELEDSEDEEFARQQLLS---RKEEEEEEDEEASDFEDSFADFSDGE 418
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 3.2
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 385 QLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEEF 540
++E E + +KE+ LS K + ERE+ K+ E + + E+ E+F
Sbjct: 536 RVELEEQRRKKKEQDRLSGKFEKMTQKEREQYAKKENERWDKKIAEIELEQF 587
>SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 338
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/49 (24%), Positives = 30/49 (61%)
Frame = +1
Query: 385 QLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELID 531
+L+ + + + E ++++++ ++S + +KK+EE E+EF+E D
Sbjct: 81 KLDLDATSTVWAESLSINREASISQSGIVDNEMEKKVEE-EEEFDEFDD 128
>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 481
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = +1
Query: 424 RIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEEFLQ 546
R+ + K ++EEA+ +K+E + ++N+ + E +Q
Sbjct: 228 RVRWQSHMESQKKKQKEEAEKEKLEYAQIDWNDFVVVEVIQ 268
>SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 288
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +1
Query: 373 RRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDE 513
+R K + +++K + ALSKK+ +K + + + EE+E++
Sbjct: 37 KREKHALSTTSTKIKKRKDALSKKVKQGIKVNKGKLSFGEDEELEND 83
>SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 279
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = -2
Query: 324 PTIDGRQLGIFYFFIR-----HISFFIATSTILIIRPVIFAATAVIVY 196
P + R +FF R ++ +FI ++LI RP++F+ +Y
Sbjct: 76 PNLTSRASWNKHFFARLMLDDNVQYFILALSMLIDRPILFSLAPYAIY 123
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 25.0 bits (52), Expect = 7.4
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 349 PKGVIEDWRRFKQLEAENRAELEKERIA--LSKKLTLSVKTEREEAQDKKIEEIEDEFNE 522
P ++D K E L K+ I+ +++ +++ TE+ E +DK I E+ D + +
Sbjct: 262 PNNSLKDTAPSKCKEPPVDEALSKKEISDDIAQITSVTPITEKIEDKDKYISEVIDTYGK 321
Query: 523 LID 531
L D
Sbjct: 322 LAD 324
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,889,087
Number of Sequences: 5004
Number of extensions: 34667
Number of successful extensions: 157
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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