Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0200
(553 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 32 0.22
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 32 0.22
At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing ... 32 0.29
At3g19290.1 68416.m02446 ABA-responsive element-binding protein ... 31 0.39
At1g32830.1 68414.m04046 hypothetical protein similar to At2g049... 31 0.39
At4g12740.1 68417.m02001 adenine-DNA glycosylase-related / MYH-r... 31 0.51
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 31 0.68
At5g07890.1 68418.m00910 myosin heavy chain-related contains wea... 30 1.2
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 30 1.2
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 30 1.2
At1g03300.1 68414.m00308 agenet domain-containing protein contai... 30 1.2
At1g80990.1 68414.m09504 XH domain-containing protein contains P... 29 1.6
At4g27595.1 68417.m03964 protein transport protein-related low s... 29 2.1
At3g58270.1 68416.m06496 meprin and TRAF homology domain-contain... 29 2.1
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 29 2.7
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 29 2.7
At5g61560.1 68418.m07725 protein kinase family protein contains ... 29 2.7
At5g55520.1 68418.m06915 expressed protein weak similarity to ph... 29 2.7
At3g22790.1 68416.m02873 kinase interacting family protein simil... 29 2.7
At5g17710.2 68418.m02076 co-chaperone grpE family protein simila... 28 3.6
At5g17710.1 68418.m02075 co-chaperone grpE family protein simila... 28 3.6
At5g03710.1 68418.m00331 hypothetical protein 28 3.6
At1g54060.1 68414.m06160 expressed protein similar to 6b-interac... 28 3.6
At5g34895.1 68418.m04113 hypothetical protein similar to At2g049... 28 4.8
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 28 4.8
At3g11100.1 68416.m01343 expressed protein similar to 6b-interac... 28 4.8
At3g09140.1 68416.m01075 expressed protein contains Pfam profile... 28 4.8
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 28 4.8
At5g60030.1 68418.m07527 expressed protein 27 6.3
At3g23070.1 68416.m02908 expressed protein contains Pfam domain,... 27 6.3
At2g38070.1 68415.m04673 expressed protein and genscan 27 6.3
At1g68790.1 68414.m07863 expressed protein 27 6.3
At1g35470.2 68414.m04401 SPla/RYanodine receptor (SPRY) domain-c... 27 6.3
At1g35470.1 68414.m04400 SPla/RYanodine receptor (SPRY) domain-c... 27 6.3
At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zi... 27 6.3
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 27 8.3
At3g58840.1 68416.m06558 expressed protein 27 8.3
At3g58350.1 68416.m06504 meprin and TRAF homology domain-contain... 27 8.3
At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family pr... 27 8.3
At3g11240.1 68416.m01367 arginine-tRNA-protein transferase, puta... 27 8.3
At2g22795.1 68415.m02704 expressed protein 27 8.3
At1g67790.1 68414.m07736 expressed protein 27 8.3
At1g56090.1 68414.m06441 tetratricopeptide repeat (TPR)-containi... 27 8.3
At1g12430.1 68414.m01436 armadillo/beta-catenin repeat family pr... 27 8.3
At1g06900.1 68414.m00733 peptidase M16 family protein / insulina... 27 8.3
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +1
Query: 307 PPINSWNGSATNTGPKGVIE--DWRRFKQLEAENRAELE-KERIALSKKLT 450
PPI + G + G ++ DWRRF+++ N A +E K++ AL +K++
Sbjct: 40 PPIGTLTGQGVSRGHTDDMDMGDWRRFREVGLLNEASMEKKDQEALLEKIS 90
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +1
Query: 307 PPINSWNGSATNTGPKGVIE--DWRRFKQLEAENRAELE-KERIALSKKLT 450
PPI + G + G ++ DWRRF+++ N A +E K++ AL +K++
Sbjct: 53 PPIGTLTGQGVSRGHTDDMDMGDWRRFREVGLLNEASMEKKDQEALLEKIS 103
>At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing
protein heterogeneous nuclear ribonucleoprotein R, Homo
sapiens, PIR:T02673; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 471
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1
Query: 388 LEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
+E+E R +L+ + + L + E EE ++++IEEIE+E E ++ E
Sbjct: 15 MESEERVDLDGDN---DPEEILEEEVEYEEVEEEEIEEIEEEIEEEVEVE 61
>At3g19290.1 68416.m02446 ABA-responsive element-binding protein 2
(AREB2) almost identical (one amino acid) to GB:AAF27182
from (Arabidopsis thaliana); contains Pfam profile
PF00170:bZIP transcription factor; identical to cDNA
abscisic acid responsive elements-binding factor (ABRE)
mRNA, partial cds GI:6739282
Length = 431
Score = 31.5 bits (68), Expect = 0.39
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 328 GSATNTGPKGVIE--DWRRFKQLEAENRAELEKERIALSKKLTL-SVKTEREEAQDKKIE 498
G +NTG + VIE R K E+ R+ K+ L + + +K +E Q K+ E
Sbjct: 340 GRRSNTGLEKVIERRQRRMIKNRESAARSRARKQAYTLELEAEIEKLKKTNQELQKKQAE 399
Query: 499 EIEDEFNEL 525
+E + NEL
Sbjct: 400 MVEMQKNEL 408
>At1g32830.1 68414.m04046 hypothetical protein similar to At2g04970,
At2g15200, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 707
Score = 31.5 bits (68), Expect = 0.39
Identities = 12/29 (41%), Positives = 24/29 (82%)
Frame = +1
Query: 466 EREEAQDKKIEEIEDEFNELIDEEFLQQY 552
EREE +++K+EE DE+N+++ EE ++++
Sbjct: 450 EREEGKEEKVEE-HDEYNDVLKEENVKEH 477
>At4g12740.1 68417.m02001 adenine-DNA glycosylase-related /
MYH-related similar to MYH (GI:18845094) [Rattus
norvegicus]; similar to adenine-DNA glycosylase
(GI:12656850) [Mus musculus]; contains TIGRFAM profile
TIGR01084: A/G-specific adenine glycosylase (hits below
the trusted cutoff)
Length = 630
Score = 31.1 bits (67), Expect = 0.51
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 373 RRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
R K+ E E E E+E K + ++EEA+++ EE E+E E EE
Sbjct: 58 REKKEAEREAEREAEREAEEEEKAEEAEAEADKEEAEEESEEEEEEEEEEAEAEE 112
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 30.7 bits (66), Expect = 0.68
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 382 KQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEF 516
K LE + RAE+ KE+ + K+ + +K+ E D++I +E EF
Sbjct: 644 KMLELKRRAEVAKEKKEAADKMIVEMKSSAETI-DQEIANVELEF 687
>At5g07890.1 68418.m00910 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, cardiac muscle alpha
isoform (MyHC-alpha) (Alpha isomyosin) (Fragment)
(Swiss-Prot:P04460) [Oryctolagus cuniculus]
Length = 409
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 352 KGVIEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDE 513
KG+IE+ + Q EN +EK+ L +K T S K+ ++ Q K E +E E
Sbjct: 217 KGIIEESQFQSQRAKENVKYIEKQNEDLREKFTASEKSIKDFFQSTK-ERLESE 269
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 388 LEAENRAELEKERIALSKKL--TLSVKTEREEAQDKKIEEIEDEFNELID 531
L+AE+ E E+ ++++KL +K R +Q +K EEIEDE E ++
Sbjct: 1060 LDAEDGGEGEESNKSMNEKLDGVKGLKMRRWPSQVEKDEEIEDEAAEYVE 1109
>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 847
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 466 EREEAQDKKIEEIEDEFNELIDEE 537
EREE +++K+EE DE+N+ D+E
Sbjct: 605 EREEGKEEKVEE-HDEYNDAADQE 627
>At1g03300.1 68414.m00308 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 670
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 421 ERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
ERI + KK V E++EA DK+I E++ E ID+E
Sbjct: 617 ERIIIEKKRQALVAKEKKEAADKRIGEMK-TCAETIDQE 654
>At1g80990.1 68414.m09504 XH domain-containing protein contains Pfam
profile PF03469: XH domain
Length = 229
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 379 FKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIE-EIEDEFNE 522
F++L AE ++ E + + K L+ SVK E +++KK + EI +E NE
Sbjct: 7 FERLTAEIKSLKESLKEKIDKVLSRSVKEASETSEEKKEQSEIAEEGNE 55
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 361 IEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
I+ ++ ++L A + +EKE LS RE A KKIEE+ L+D+E
Sbjct: 678 IDYLKKIEELSAAKESLVEKETKLLSTVQEAEELRRRELACLKKIEELSAVNERLVDKE 736
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 373 RRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
++ ++L A N ++KE S + V ERE K+IEE+ L+++E
Sbjct: 720 KKIEELSAVNERLVDKETKLQSSIQEVEVLKEREAENIKQIEELSLSNERLVEKE 774
>At3g58270.1 68416.m06496 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 343
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 433 LSKKLT-LSVKTEREEAQDKKIEEIEDEFNEL 525
L +KL +S K E EEA + ++ EIE+E EL
Sbjct: 281 LEEKLEEVSEKKENEEAGETRVHEIEEELKEL 312
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 28.7 bits (61), Expect = 2.7
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +1
Query: 364 EDWRR-FKQLEAENRAE----LEKERIALSKKLTLSVKTERE---EAQDKKIEEIEDEFN 519
E WRR + L A+N A +EKE + +K +K E E E D+ IEE + E +
Sbjct: 541 ETWRRRCEALTAQNEASPAEGIEKE-LENAKLRNKRMKEEHESVRELADRLIEEKDREIS 599
Query: 520 ELIDE 534
L+DE
Sbjct: 600 RLVDE 604
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 28.7 bits (61), Expect = 2.7
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +1
Query: 364 EDWRR-FKQLEAENRAE----LEKERIALSKKLTLSVKTERE---EAQDKKIEEIEDEFN 519
E WRR + L A+N A +EKE + +K +K E E E D+ IEE + E +
Sbjct: 541 ETWRRRCEALTAQNEASPAEGIEKE-LENAKLRNKRMKEEHESVRELADRLIEEKDREIS 599
Query: 520 ELIDE 534
L+DE
Sbjct: 600 RLVDE 604
>At5g61560.1 68418.m07725 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 796
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 361 IEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIED 510
+ + R +Q +AEN AEL +E I + L + EE + +K + +ED
Sbjct: 354 VVEMERERQEDAENEAELVRECIERETEERLEAEARAEEVRKEK-QRLED 402
>At5g55520.1 68418.m06915 expressed protein weak similarity to
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] GI:8745333; expression supported
by MPSS
Length = 802
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 391 EAENRAELEKERIALSKKLTLSVKTEREEAQDKKIE 498
E E E+E E I+L+ L + + + R A+D +IE
Sbjct: 539 ERERWTEMESEWISLTDDLRMDIDSHRRHAEDLEIE 574
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 370 WRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
+ F QL ++AEL KER +L +L +VK E+ +KK E+E ++ +L E+
Sbjct: 707 FEEFFQLLKNDKAELIKERESLISQLN-AVK-EKLGVLEKKFTELEGKYADLQREK 760
>At5g17710.2 68418.m02076 co-chaperone grpE family protein similar
to co-chaperone CGE1 precursor isoform a [Chlamydomonas
reinhardtii] GI:15384277; contains Pfam profile PF01025:
co-chaperone GrpE
Length = 326
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 409 ELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEEFL 543
E E+E A+ L S K + + KI EIE + DE+FL
Sbjct: 103 EAEEEEAAVITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFL 147
>At5g17710.1 68418.m02075 co-chaperone grpE family protein similar
to co-chaperone CGE1 precursor isoform a [Chlamydomonas
reinhardtii] GI:15384277; contains Pfam profile PF01025:
co-chaperone GrpE
Length = 324
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 409 ELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEEFL 543
E E+E A+ L S K + + KI EIE + DE+FL
Sbjct: 101 EAEEEEAAVITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFL 145
>At5g03710.1 68418.m00331 hypothetical protein
Length = 81
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 361 IEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
+E W ++ E E E E+E ++ + E EE ++++ EE E+E E +EE
Sbjct: 1 MEFWGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 59
>At1g54060.1 68414.m06160 expressed protein similar to
6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum]
GI:18149189
Length = 383
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 355 GVIEDWRRFKQLEAENRAELEKERIALSKKLTLS----VKTEREEAQDKKIEE 501
G E + + + + + AELEKER+ +K++ L +KT+ E Q+ + EE
Sbjct: 303 GFTEAYEKAETAKLKLMAELEKERMKFAKEMELQRMQFLKTQLEITQNNQEEE 355
>At5g34895.1 68418.m04113 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At3g47270, At2g02200
Length = 490
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 466 EREEAQDKKIEEIEDEFNELIDEE 537
EREE +++K+EE +E+N+ D+E
Sbjct: 248 EREEGKEEKVEE-HNEYNDAADQE 270
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 379 FKQLEAENRAELEKERIALSKKLTLSVKT--EREEAQDKKIEEIEDEFNELIDEE 537
F+ E ++ E E+ER + +K + S K E E +K+EE E+E E +EE
Sbjct: 228 FQFNEEDDEEEEEEERSGIYRKKSGSGKVVEEMEPKTPEKVEEEEEEDEEEDEEE 282
>At3g11100.1 68416.m01343 expressed protein similar to
6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum]
GI:18149189
Length = 249
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/57 (26%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +1
Query: 292 KNAELPPINSWNGSATNTGPKGVIEDWRRFKQLEAENRA---ELEKERIALSKKLTL 453
K+ ++ ++S GSA + +++ F+++E + + ELEK+R+ ++K+L L
Sbjct: 164 KHRKVEDVDSSEGSAFRELARSILKLGEAFERIEGKKQQMMIELEKQRMEVAKELEL 220
>At3g09140.1 68416.m01075 expressed protein contains Pfam profile
PF05056: Protein of unknown function (DUF674);
expression supported by MPSS
Length = 473
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 304 LPPINSWNGSATNTGPKGVIEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREE-- 477
LP + WN SA N + +R FK+++A + ++ + K L V TE++E
Sbjct: 311 LPLESVWNISAGNISLGCIGNLFRSFKRIDASSSSKTKLPSFYSCPKQLLDVVTEQQEIY 370
Query: 478 AQDKKIEEIEDEFN 519
K + E +E++
Sbjct: 371 CSFKCVVETNNEYD 384
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240: Ubiquitin
family
Length = 1919
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 388 LEAENRAELEKERIALSKKL--TLSVKTEREEAQDKKIEEIEDEFNE 522
L+AE E E+ I+ + KL +K R +Q + EEIEDE E
Sbjct: 1228 LDAEEGGEGEESNISKNDKLDGVKGLKMRRRPSQVETDEEIEDEATE 1274
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 382 KQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKI-EEIEDE 513
++LEAE R+E +ER KK + E+ D+K+ E++EDE
Sbjct: 135 EKLEAEQRSEERRERKKEKKK---KKNNKDEDVVDEKVKEKLEDE 176
>At3g23070.1 68416.m02908 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 881
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 310 PINSWNGSATN-TGPKGVIEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQD 486
P WN T P+ VIE+ E + E++ L + + E+++ Q
Sbjct: 311 PSGKWNKQRREETPPEAVIENHD-----ETTTMVDKSDEKVHLPQLEQETTSVEKKD-QT 364
Query: 487 KKIEEIEDEFNELIDE 534
+ E EDE +EL+D+
Sbjct: 365 SPVVEYEDELDELLDD 380
>At2g38070.1 68415.m04673 expressed protein and genscan
Length = 619
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 391 EAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFN 519
E +N +++ E + + + E EE + KK+E+ EFN
Sbjct: 184 EQDNEKDIKFETFKEPRSVIDEIVEEEEEEETKKVEDFTMEFN 226
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +1
Query: 364 EDWRRFKQLEAENRAELE-KERIALSKKLTLSVKTERE 474
+DW++FK++ + A LE K+R AL +K+ +K E+E
Sbjct: 39 DDWQKFKEVGLLDEASLERKDRDALIEKI---LKLEKE 73
>At1g35470.2 68414.m04401 SPla/RYanodine receptor (SPRY)
domain-containing protein similar to RanBPM [Homo
sapiens] GI:15080674; contains Pfam profile PF00622:
SPRY domain
Length = 467
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 295 NAELPPINSWNGSATNTGPKG 357
N+ PP NS NG TN G G
Sbjct: 2 NSSPPPANSANGDTTNNGENG 22
>At1g35470.1 68414.m04400 SPla/RYanodine receptor (SPRY)
domain-containing protein similar to RanBPM [Homo
sapiens] GI:15080674; contains Pfam profile PF00622:
SPRY domain
Length = 465
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 295 NAELPPINSWNGSATNTGPKG 357
N+ PP NS NG TN G G
Sbjct: 2 NSSPPPANSANGDTTNNGENG 22
>At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +1
Query: 382 KQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNE 522
KQL+ + E+E + + ++ + + +EA KK++E+ DE ++
Sbjct: 406 KQLDTKQTLEMEIQELKGKLQVMKHLGDDDDEAVQKKMKEMNDELDD 452
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 27.1 bits (57), Expect = 8.3
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 283 KEIKNAELPPINSWNGSATNTGPKGVIEDWRRFKQLEAENRAELEKERIALSKKLTLSVK 462
KE++ P NG + G K V R ++ ++ + +KE SKK +S K
Sbjct: 151 KEVEKKASKPETEKNGKMGDIGGKIVAAASRMSERFRSKGNVD-QKETSKASKKPKMSSK 209
Query: 463 -TEREEAQDK-KIEEIEDEFNELIDE 534
T+R+ D+ + EE D+ + +E
Sbjct: 210 LTKRKHTDDQDEDEEAGDDIDTSSEE 235
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 397 ENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
++RAE+EK L +K+ + E EE + KK+ E+E E+ DE+
Sbjct: 149 KDRAEVEKRVRDLERKIGVLEVREMEE-KSKKLRS-EEEMREIDDEK 193
>At3g58350.1 68416.m06504 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 301
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 433 LSKKL-TLSVKTEREEAQDKKIEEIEDEFNEL 525
L KKL +S K E EEA + ++E+E+E ++
Sbjct: 239 LEKKLYEVSEKKENEEASETGLQEMEEELKDM 270
>At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family
protein / kinesin motor family protein kinesin,
Syncephalastrum racemosum, AJ225894
Length = 941
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = +1
Query: 382 KQLEAEN-RAELEKERIALSKKLTLS---VKTEREEAQDKKI--EEIEDEFNELIDE 534
K+LE EN R+ ++++ K+L + E EEA + KI EE+ + +DE
Sbjct: 642 KKLEGENARSNAAEDQLRQMKRLISDRQVISQENEEANELKIKLEELSQMYESTVDE 698
>At3g11240.1 68416.m01367 arginine-tRNA-protein transferase,
putative / arginyltransferase, putative /
arginyl-tRNA-protein transferase, putative similar to
SP|Q9ZT48 Arginine-tRNA-protein transferase 1 (EC
2.3.2.8) (R-transferase 1) (Arginyltransferase 1)
(Arginyl-tRNA--protein transferase 1) {Arabidopsis
thaliana}; contains Pfam profiles PF04377:
Arginine-tRNA-protein transferase C terminus, PF04376:
Arginine-tRNA-protein transferase N terminus
Length = 605
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/50 (24%), Positives = 30/50 (60%)
Frame = +1
Query: 385 QLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDE 534
+L+A+ + E + ++ S+++++SVK A+ +K E+E +L ++
Sbjct: 117 ELDAKPSEQTEDQDVSFSREVSVSVKKSLGAAKREKNNELEPIMKDLSEQ 166
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +1
Query: 385 QLEAENR-AELEKERIALSKKLTLSVKTE-REEAQDKKIEEIEDEFNELIDEEFLQQ 549
Q E+++R E +++ + S++ T+ +TE +E+ + E+ ED+ E I+ FL++
Sbjct: 444 QEESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEE 500
>At1g67790.1 68414.m07736 expressed protein
Length = 576
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 127 CFIPFSYV*FRMTTLDDKILGEKVHN 204
C I F + F+ LD+ ILGE + N
Sbjct: 177 CIIKFEKIPFKQAKLDNNILGETLSN 202
>At1g56090.1 68414.m06441 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain;
similar to infertility-related sperm protein [Homo
sapiens] GI:10863768, TPR-containing protein involved in
spermatogenesis TPIS [Mus musculus] GI:6272680
Length = 272
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 379 FKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEEF 540
++ LEA R +L I S+ ++A+DK+ E+E NE D+ F
Sbjct: 114 YQNLEARLRTQLSLAPIPESEAELEEESDVEQDAEDKESREVELGVNERRDKRF 167
>At1g12430.1 68414.m01436 armadillo/beta-catenin repeat family
protein / kinesin motor family protein
Length = 919
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +1
Query: 361 IEDWRRFKQLEAENRAELEKERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEE 537
+E ++ ++ ++N+ +L ER+AL +K L + + + +EE+ E +L+ +E
Sbjct: 487 MESIKKLEENWSKNQKKLAAERLALGEKNGLDITSNGNRSIAPALEEV-SELKKLLQKE 544
>At1g06900.1 68414.m00733 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain; similar to insulin-degrading enzyme
(Insulysin, Insulinase, Insulin protease) [Mouse]
SWISS-PROT:Q9JHR7
Length = 1023
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 418 KERIALSKKLTLSVKTEREEAQDKKIEEIEDEFNELIDEEFLQQ 549
K + + + L + E EEAQ + + + D F+E+I+E Q
Sbjct: 806 KNKSETNSVVELYYQIEPEEAQSTRTKAVLDLFHEIIEEPLFNQ 849
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,576,079
Number of Sequences: 28952
Number of extensions: 174191
Number of successful extensions: 922
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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