Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0199
         (524 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-1|CAA86739.2|  360|Caenorhabditis elegans Hypothetical pr...    28   3.6  
AF045646-11|AAK29829.1|  205|Caenorhabditis elegans Hypothetical...    27   6.2  
L14745-9|AAK71355.2|  380|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AF039050-7|ABC71842.1|  516|Caenorhabditis elegans Cytochrome p4...    27   8.2  
AF024499-3|AAB70357.1|  374|Caenorhabditis elegans Hypothetical ...    27   8.2  

>Z46787-1|CAA86739.2|  360|Caenorhabditis elegans Hypothetical
           protein C16C10.1 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +1

Query: 283 SSCVHSKQQSCPG--SLRCCCKIECPKHPKHWNVLEIVQVSASHSFNVGVIVLHLALCAL 456
           S C   K  +C G  S  C   +EC K  K  +V  + QVSAS S   G IV  L +  L
Sbjct: 3   SPCESGKTTNCSGAPSSSCAKSVECCK--KQLSVGVLQQVSASSS---GAIVTSLFMTPL 57

Query: 457 RVLFI 471
            V+ I
Sbjct: 58  DVVKI 62


>AF045646-11|AAK29829.1|  205|Caenorhabditis elegans Hypothetical
           protein F56B3.6 protein.
          Length = 205

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 166 FYNCFVAIYLVCFDCEIIL*WVK*FFY 86
           ++ CF  +YLV F  E IL W   F+Y
Sbjct: 134 YWTCFAVLYLVDFFSEAILSWFP-FYY 159


>L14745-9|AAK71355.2|  380|Caenorhabditis elegans Hypothetical
           protein C02F5.12 protein.
          Length = 380

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 356 LGHSILQQHLRLPGQLCCFECTQL 285
           L H++   + ++P +LC FECT +
Sbjct: 260 LDHALTHSNRKIPCKLCGFECTNV 283


>AF039050-7|ABC71842.1|  516|Caenorhabditis elegans Cytochrome p450
           family protein34A9, isoform b protein.
          Length = 516

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 359 CLGHSILQQHLRLPGQLCCFECTQLDEYFTLLCT 258
           CLG S+ +  L L  ++C F+   L+E+F+   T
Sbjct: 443 CLGESLARAELYLASEMCVFD--TLNEFFSFQIT 474


>AF024499-3|AAB70357.1|  374|Caenorhabditis elegans Hypothetical
           protein F42G2.5 protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = +1

Query: 259 VHNSVKYSSSCVHSKQQSCPGSLRCCCKIECPKHPKHWNVLEIVQV 396
           V N +     C HS  QSC   L   C I CP      NV  +  +
Sbjct: 145 VDNQIPRILQCGHSICQSCASKLAKNCVILCPFCRNETNVSSVASL 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,742,820
Number of Sequences: 27780
Number of extensions: 252478
Number of successful extensions: 814
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)