Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0198
(309 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 28 0.019
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 25 0.24
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 22 1.3
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 2.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 2.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 2.2
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 20 6.8
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 20 6.8
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 20 6.8
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 20 6.8
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 20 6.8
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 20 6.8
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 20 6.8
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 28.3 bits (60), Expect = 0.019
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 90 SASRGCARASRTGTPI---VPICTGQRNVQVSQAPVV*RGGAREGIMP 224
+A+RG ARA G P+ P QR V Q P + GG R G P
Sbjct: 288 AAARGAARADGAGGPLHDHRPALAQQRRVAAVQVPQL-AGGGRRGPGP 334
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 24.6 bits (51), Expect = 0.24
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 23 LYGPVESVTQTTHPHTCSR 79
+YG +E T+TTHP+ R
Sbjct: 342 IYGVLEEYTRTTHPNEPGR 360
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 22.2 bits (45), Expect = 1.3
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +2
Query: 65 HTCSRMTSQRFSRMCQSLQNRNTHCSNLHRPKERAGISSTSGIARRSK 208
H + T++ R+ + QN+N S + ++ + S ARR+K
Sbjct: 112 HGTNNGTNKNMRRLSTTTQNKNDDPSYWEKRRKNNEAAKRSRDARRAK 159
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 2.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 31 SSGKRNPDYTSTYV 72
S G RNP +TS+Y+
Sbjct: 116 SVGSRNPIHTSSYM 129
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 2.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 31 SSGKRNPDYTSTYV 72
S G RNP +TS+Y+
Sbjct: 349 SVGSRNPIHTSSYM 362
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 2.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 31 SSGKRNPDYTSTYV 72
S G RNP +TS+Y+
Sbjct: 349 SVGSRNPIHTSSYM 362
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 19.8 bits (39), Expect = 6.8
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +2
Query: 56 THPHTCSRMTSQRFSRMCQSLQNRNTHCSNL 148
T+P + T +RF R + L R H L
Sbjct: 550 TNPSDYVKQTERRFYRHRERLVARGIHAEAL 580
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 19.8 bits (39), Expect = 6.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 46 NPDYTSTYVFPN 81
+P+Y S VFPN
Sbjct: 446 DPNYISPEVFPN 457
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 19.8 bits (39), Expect = 6.8
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 255 GS*NKKLLDNIYFYF 299
G KL+ N YF+F
Sbjct: 127 GKKESKLMKNFYFWF 141
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 19.8 bits (39), Expect = 6.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 273 IFCFMSHSASLS 238
+FC SH ASL+
Sbjct: 298 VFCDCSHQASLN 309
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 19.8 bits (39), Expect = 6.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 273 IFCFMSHSASLS 238
+FC SH ASL+
Sbjct: 298 VFCDCSHQASLN 309
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 19.8 bits (39), Expect = 6.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 273 IFCFMSHSASLS 238
+FC SH ASL+
Sbjct: 298 VFCDCSHQASLN 309
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 19.8 bits (39), Expect = 6.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 46 NPDYTSTYVFPN 81
+P+Y S VFPN
Sbjct: 394 DPNYISPEVFPN 405
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,628
Number of Sequences: 336
Number of extensions: 1731
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 5624413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -