Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0198
(309 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 46 5e-06
SB_40017| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_23832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_25108| Best HMM Match : Cornifin (HMM E-Value=0.00015) 27 3.1
SB_56327| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0) 26 5.4
SB_13677| Best HMM Match : Dehydrin (HMM E-Value=4) 26 5.4
SB_57150| Best HMM Match : ThiF (HMM E-Value=2.8e-35) 26 5.4
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 26 5.4
SB_54814| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_53153| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_36968| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_28803| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_16548| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_36343| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_33651| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_21417| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 46.4 bits (105), Expect = 5e-06
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +1
Query: 1 NNPLRAGALRSSGKRNPDYTSTYVFPNDF 87
NNPL R+SGK NPDY STYVF NDF
Sbjct: 573 NNPLCPRTARASGKENPDYESTYVFENDF 601
>SB_40017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = -2
Query: 251 RRPFLRIAP---GHDALPCSSSLYHWCLR 174
+R FL++ P H +L CS +++ WC R
Sbjct: 458 KRTFLKLLPVVSDHPSLLCSMAIWRWCCR 486
>SB_23832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 215 HHAPGLSVERDAEWLI 262
HH PG VE D EWL+
Sbjct: 307 HHLPGKMVETDNEWLV 322
>SB_25108| Best HMM Match : Cornifin (HMM E-Value=0.00015)
Length = 858
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 214 ASCPGAIRRKGRRMAHKTKNCWIIFIFILSDY 309
ASCPG+ R+ HK ++CW+IF +L ++
Sbjct: 394 ASCPGSALRR-----HK-EDCWVIFSGVLPNH 419
>SB_56327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = -1
Query: 108 HILEKRWEVIREHVCGCVVWVTLSTGP 28
H+ + W+++RE C V T++ P
Sbjct: 71 HVCRRHWDMLREATCAAHVPCTINNSP 97
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 152 RPKERAGISSTSGIARRSKGGHHAPGLSVERDAEWLIKQKIA 277
RP+ SS SG+ R KG +P +SV + + ++++
Sbjct: 1713 RPRSPVRSSSPSGVRREYKGSDRSPVVSVASRSIYRANERVS 1754
>SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 839
Score = 26.2 bits (55), Expect = 5.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 90 WEVIREHVCGCVVWVT 43
W ++ EH C C+V VT
Sbjct: 249 WRMVWEHGCSCIVMVT 264
>SB_13677| Best HMM Match : Dehydrin (HMM E-Value=4)
Length = 254
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 74 SRMTSQRFSRMCQSLQNRNTHCSNLHRPKERAGI-SSTSGIARRSKGGHHAPGLS 235
S+ T ++F ++ + + R H + R R SS+SG++R + G PG S
Sbjct: 32 SQTTMEKFFQV-KFQETRKKHSKRVRRVINRMRYDSSSSGLSREDEAGRARPGTS 85
>SB_57150| Best HMM Match : ThiF (HMM E-Value=2.8e-35)
Length = 1026
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 297 NKNKYYPAIFCFMSHSASLSTDSP 226
N+N YY + FM+ S S S D P
Sbjct: 459 NRNWYYQVVLPFMTESYSSSQDPP 482
>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1677
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 151 PAKGTCRYLKHQWYSEEEQGRASCPGAIRRKGRRMAHKTKNC 276
P K TC +L W E SCPG ++ ++ H K C
Sbjct: 212 PDKATC-FL---WKQETPSTEVSCPGGYLQQCQKKGHFAKVC 249
>SB_54814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
Frame = -1
Query: 114 LWHILEKRWEVIREHVCG----CVVW 49
LW++LE +WE I ++ G C +W
Sbjct: 48 LWNLLETKWEHIIVYLVGFSVICAIW 73
>SB_53153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +2
Query: 59 HPHTCSRMTSQRFSRMCQSLQNRNTHCSNL 148
HPH + R R+C + ++ N C+ L
Sbjct: 110 HPHHTKKAIPLRIRRICSTEESFNNRCNEL 139
>SB_36968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 41 SVTQTTHPHTCSRMTSQRFSRMCQSLQNRNTHCSNLHRPKERAGISSTSGIARRSKGGHH 220
S T+T+ + S S S RN + PK ++ SS+S R++K H
Sbjct: 44 SSTETSQRSRARKRQSSSSSSTTSSSPERNIKKKSSKAPKRQSSSSSSSSPKRKTKKKQH 103
>SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 178 KHQWYSEEEQGRASCPGAI--RRKGRRMAHKTKNCWIIF 288
++ W++ E+G A PG + RR GR +H C+ +
Sbjct: 700 ENSWHTVGERGEAGVPGLVICRRCGRH-SHNESACYATY 737
>SB_28803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 77 RMTSQRFSRMCQSLQNRNTHCSNL 148
R+ + SR C+SL+ R+T CS L
Sbjct: 54 RVNAVSRSRYCRSLRQRHTSCSPL 77
>SB_16548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 182 TSGIARRSKGGHHAPGLSVERDAEWLIKQK-IAG*YL 289
TSG R S G HAP LS + L++ + + G YL
Sbjct: 6 TSGSHRMSLGSSHAPALSSDTSHARLMRMRTLDGCYL 42
>SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 612
Score = 25.4 bits (53), Expect = 9.5
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = -3
Query: 244 PFYG*PRGMMPSL--------APPRYTTGA*DTCTFLWPVQIGTMGVPVLEALAHPREAL 89
P+YG P ++PSL AP T A C+ L+P + +P L L + A
Sbjct: 210 PYYG-PSSLLPSLPLLRPFKLAPFSSLTTALQACSLLFPYYGPSNLLPSLPLLRPFKLAT 268
Query: 88 GSHSGTRMWMCSLGYAFH 35
S T + CSL + ++
Sbjct: 269 FSPITTALQACSLFFPYY 286
>SB_36343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 27 TVQWKA*PRLHIHIRVPE*---LPSASRGCA-RASRTGTPIVPICTGQRN 164
+VQW H+H+R + L SAS + TGTP C+GQ N
Sbjct: 245 SVQWIPVQLGHVHLRWSDFAGFLSSASNAVSLHLHTTGTPSWSSCSGQMN 294
>SB_33651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 47 TQTTHPHTCSRMTSQRFSRMCQSLQNRNTHCSNLHRPKERAGIS 178
+Q + T +R SQ F+R ++ Q NL +E AGIS
Sbjct: 65 SQESQEFTRTRKNSQEFTRTRKNSQEFTRTRRNLKNSQELAGIS 108
>SB_21417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 122 NRNTHCSNLHRPKE 163
NR+T CS HRP E
Sbjct: 7 NRSTDCSQFHRPAE 20
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,843,732
Number of Sequences: 59808
Number of extensions: 223353
Number of successful extensions: 567
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 389827759
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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