Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0198
         (309 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical pr...    41   2e-04
Z71186-7|CAM35835.1|  552|Caenorhabditis elegans Hypothetical pr...    26   6.2  
AJ505020-1|CAD43602.1|  382|Caenorhabditis elegans alpha-1->3-fu...    26   6.2  
AC006674-5|AAF39933.2|  382|Caenorhabditis elegans Fucosyl trans...    26   6.2  
Z95623-2|CAB09134.1|  509|Caenorhabditis elegans Hypothetical pr...    25   8.1  
Z92827-5|CAB07325.1|  732|Caenorhabditis elegans Hypothetical pr...    25   8.1  
Z48717-9|CAA88611.1|  509|Caenorhabditis elegans Hypothetical pr...    25   8.1  

>Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical
           protein ZK1058.3 protein.
          Length = 352

 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 18/28 (64%), Positives = 19/28 (67%)
 Frame = +1

Query: 4   NPLRAGALRSSGKRNPDYTSTYVFPNDF 87
           NPL  G  RSSG  N +Y STYVF NDF
Sbjct: 52  NPLAPGGTRSSGIANENYVSTYVFDNDF 79


>Z71186-7|CAM35835.1|  552|Caenorhabditis elegans Hypothetical
           protein F23D12.10 protein.
          Length = 552

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 101 RMCQSLQNRNTHCSNLHRPKERAGISSTSGIARRSKGGHHAPG 229
           ++C S  N N  C N  R +E+    + S I + SK  ++  G
Sbjct: 115 KLCTSDNNNNNSCKNDQRNEEKVDDKTRSLIKKLSKIANYVFG 157


>AJ505020-1|CAD43602.1|  382|Caenorhabditis elegans
           alpha-1->3-fucosyltransferase homologueprotein.
          Length = 382

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 230 APGHDALPCSSSLYHWCLRY 171
           +P H+ LP   +L++W + Y
Sbjct: 132 SPSHEQLPTEKNLFNWTMTY 151


>AC006674-5|AAF39933.2|  382|Caenorhabditis elegans Fucosyl
           transferase protein 4 protein.
          Length = 382

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 230 APGHDALPCSSSLYHWCLRY 171
           +P H+ LP   +L++W + Y
Sbjct: 132 SPSHEQLPTEKNLFNWTMTY 151


>Z95623-2|CAB09134.1|  509|Caenorhabditis elegans Hypothetical
           protein T10B9.4 protein.
          Length = 509

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 256 PFGVPFYG*PRGMMPSLAPPRYT 188
           P+GVP +G    M+    PP YT
Sbjct: 29  PWGVPIFGKAGAMLEDSFPPGYT 51


>Z92827-5|CAB07325.1|  732|Caenorhabditis elegans Hypothetical
           protein C29F7.6 protein.
          Length = 732

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -3

Query: 160 LWP--VQIGTMGVPVLEALAHPREALGSHSGTRMWMCSLGY 44
           LWP   ++   G+PV++ +    + +   +GT  W+ S+G+
Sbjct: 557 LWPNEEELLNWGIPVMKFIQETDDTVYVGTGTYHWVQSIGF 597


>Z48717-9|CAA88611.1|  509|Caenorhabditis elegans Hypothetical
           protein T10B9.4 protein.
          Length = 509

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 256 PFGVPFYG*PRGMMPSLAPPRYT 188
           P+GVP +G    M+    PP YT
Sbjct: 29  PWGVPIFGKAGAMLEDSFPPGYT 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,853,036
Number of Sequences: 27780
Number of extensions: 155129
Number of successful extensions: 425
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)