Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0197
         (562 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278...    30   1.1  
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69...    30   1.1  
03_01_0306 + 2391831-2391858,2392831-2392902,2393511-2393698,239...    28   5.9  
08_02_0059 - 11778739-11780998,11781744-11781751                       27   7.7  

>10_07_0176 -
           13826764-13827064,13827271-13827377,13827474-13827836,
           13827912-13828079,13828153-13828374,13828784-13829023,
           13829640-13829719,13829853-13830018,13830720-13830783,
           13830861-13830962,13831085-13831227,13831370-13831474,
           13831551-13831706,13832125-13832241,13832315-13832392,
           13832466-13832550,13833334-13833455,13833546-13833611,
           13835190-13835284,13835427-13835523,13835873-13835983,
           13836083-13836164,13836292-13836353,13836620-13836685,
           13838002-13838232
          Length = 1142

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -2

Query: 324 RIPSVAHTSSPTADSCPEW-KCMAISNNISPKDAVTPEVLSK*ASS 190
           RI   A  + P  ++C E+ +C+A+ + + P+   TPE +S  A+S
Sbjct: 475 RIMCGAWRNEPNPEACKEFFRCLALCHTVLPEGEETPEKISYQAAS 520


>03_01_0085 +
           690618-691012,691114-691193,691775-691959,692363-693320,
           693391-693518,693951-694010,694113-694163,694704-694821,
           694990-695915,695916-697707,697810-697943,698029-698526
          Length = 1774

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -1

Query: 466 WQISWNIAIEISCYRNFDCMSCHNLLCKYFLCKGLFYSSQPIRSYWNT 323
           W   W+I        ++ C +C   LCK  + +G F+S +  + + +T
Sbjct: 156 WNCGWHICSSCEKAVHYMCYTCTYSLCKVCIKQGKFFSVRGTKGFCDT 203


>03_01_0306 +
           2391831-2391858,2392831-2392902,2393511-2393698,
           2394143-2394203,2394306-2394368,2394396-2394474,
           2394557-2394689,2394727-2394934,2398088-2398143,
           2398252-2400030,2400128-2400281,2400467-2401125
          Length = 1159

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -2

Query: 348 SPLGLTGTRIPSVAHTSSPTAD-SCPEWKCM---AISNNISPKDAVTPEVL 208
           SPLG  GTR+P  ++ S  ++D S  EW  +     S N+   D + P V+
Sbjct: 828 SPLGALGTRVPLASNASIVSSDVSQTEWTSLQDDVASENLEKFD-IAPTVV 877


>08_02_0059 - 11778739-11780998,11781744-11781751
          Length = 755

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 21/81 (25%), Positives = 37/81 (45%)
 Frame = +2

Query: 317 GMRVPVRPNGLARIKQAFTQEIFTEQVVTAHAVKVPVTANLNSNIPGYLPVHCIHQLLKS 496
           G  +  RP+G   +K+    +     V+  HA+ V V+ ++  N   Y   H IH   K 
Sbjct: 672 GEELVFRPDGFHCLKKLEVNDTSKRVVIEEHALPVLVSLHIIGNSRNY--QHSIHPTHKI 729

Query: 497 RAFSKHKVPIKNWIYRQICNC 559
               +H+  I   ++++IC C
Sbjct: 730 INKIRHE-DIN--LFQRICTC 747


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,152,249
Number of Sequences: 37544
Number of extensions: 305251
Number of successful extensions: 767
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)