Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0196
         (576 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    35   1.2  
UniRef50_Q0LCM7 Cluster: Regulator of polyketide synthase expres...    34   2.8  
UniRef50_Q6CX03 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    34   2.8  
UniRef50_Q60P15 Cluster: Putative uncharacterized protein CBG224...    33   3.6  
UniRef50_Q0UYE6 Cluster: Predicted protein; n=1; Phaeosphaeria n...    32   8.4  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -1

Query: 366 F*LLKWVDELIVHLV*SGY*SP 301
           F LL+WVDEL  HLV SGY SP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q0LCM7 Cluster: Regulator of polyketide synthase
           expression-like; n=1; Herpetosiphon aurantiacus ATCC
           23779|Rep: Regulator of polyketide synthase
           expression-like - Herpetosiphon aurantiacus ATCC 23779
          Length = 477

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = -3

Query: 571 INKVQSACVRHCDRLVFPAFHILY*GGRGLKLPTISFHKPSHRLR 437
           I++V +A  R CDRL +PAF   + G   L +P  S   P  RLR
Sbjct: 269 IDRVMAAVRRACDRLRYPAFIADHDGIIVLAMPIDSLDNPEQRLR 313


>UniRef50_Q6CX03 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome B of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 104

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 23/70 (32%), Positives = 38/70 (54%)
 Frame = +1

Query: 118 LDGATCVCQLVTSIDRCRCNDNTNLLFRWRYLCVVRERFLAHLRP*NLISRWVAHLRCRC 297
           LD   C+ Q +++I+ C      +L F+  YL +    +L H+R   L  R + HLRC C
Sbjct: 25  LDLFGCLNQKLSAINNCCWK---SLSFKLYYLGIFISTYLLHVRNAVLSCRCLFHLRC-C 80

Query: 298 LWASVTTSHQ 327
           +++ +T S Q
Sbjct: 81  IYSFLTFSMQ 90


>UniRef50_Q60P15 Cluster: Putative uncharacterized protein CBG22457;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG22457 - Caenorhabditis
           briggsae
          Length = 395

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
 Frame = -2

Query: 320 EVVTEAHRHLQRKCATHLEIKF*GLKCARN-LSRTTHRYRHRNNK---FVLSLQRHLSIE 153
           + +TE  R  QRK  T L IK    K   N L++    ++HR NK   F++ L +   + 
Sbjct: 302 QTITENWRRTQRKVGTTLIIKRVHTKDVENVLNQILQEWQHRENKNEDFIVHLYQDKKLR 361

Query: 152 VTS*HTH 132
           ++S  TH
Sbjct: 362 ISSGDTH 368


>UniRef50_Q0UYE6 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 704

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = -3

Query: 460 HKPSHRLRVTAAGTPEGPNSPVQSVK*GSSFFLI 359
           H P+H+ +  AA TP+GP+SP +++  GS  +++
Sbjct: 125 HAPTHQDQANAAATPQGPDSP-ETLAAGSPVYVL 157


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,472,464
Number of Sequences: 1657284
Number of extensions: 12668339
Number of successful extensions: 28586
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28576
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)