Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0196
         (576 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical...    30   1.4  
AL132948-23|CAC51049.1|  429|Caenorhabditis elegans Hypothetical...    28   4.1  
U97000-9|AAC47998.1|  345|Caenorhabditis elegans Seven tm recept...    27   7.2  
AC199169-4|ABO33250.1|  275|Caenorhabditis elegans Hypothetical ...    27   9.5  

>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
            protein Y69A2AR.31 protein.
          Length = 1219

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -2

Query: 446  PVESYRRWDAGGTQLAGSVGEIGFKFFFNCLNGWTSS*STWCEVVTEAH 300
            P+E     DA G ++   +G I  K+       W+   STWCE  +E H
Sbjct: 949  PMEGCNTKDANGREIFTHIGAIMRKYV-----DWSGRCSTWCECESEDH 992


>AL132948-23|CAC51049.1|  429|Caenorhabditis elegans Hypothetical
           protein Y39B6A.31 protein.
          Length = 429

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 319 KWLLKPIDIYNVNAPPTLRLSSKVSSAQEIFHGQHT 212
           K LLK +D+ +V  PP ++  SK+ S  ++  G  T
Sbjct: 261 KGLLKSVDLLSVLKPPVIQTMSKMRSQLKVCTGYST 296


>U97000-9|AAC47998.1|  345|Caenorhabditis elegans Seven tm receptor
           protein 135 protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 196 FRWRYLCVVRERFLAHLRP*NLISRWVAHLRCRCLW 303
           F +RYL V R  FL HL+  NL   ++  +    +W
Sbjct: 114 FIFRYLAVCRTHFLVHLQGINLCLLFIPSIFVFAVW 149


>AC199169-4|ABO33250.1|  275|Caenorhabditis elegans Hypothetical
           protein F38A1.10 protein.
          Length = 275

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 64  TSYLYHHVPNNRLGYSTT 11
           T+YL  H+PN++LG+  T
Sbjct: 226 TAYLLDHLPNSKLGFGDT 243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,928,620
Number of Sequences: 27780
Number of extensions: 302694
Number of successful extensions: 672
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)