Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0195
(485 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1498 + 26995209-26995752,26995945-26996513 31 0.49
01_06_1201 - 35380338-35380496,35381200-35381322,35381521-353820... 31 0.49
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 30 0.86
07_03_0943 - 22778877-22780970,22781376-22781480,22781481-227820... 29 2.6
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 28 3.5
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 28 4.6
07_01_0886 - 7356591-7356662,7357002-7357079,7357373-7357444,735... 27 6.0
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 27 8.0
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 27 8.0
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 27 8.0
>07_03_1498 + 26995209-26995752,26995945-26996513
Length = 370
Score = 31.1 bits (67), Expect = 0.49
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 292 RQLAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 471
++L P HW + P + + G G+ RF + TP E D+ + VH+ + SD
Sbjct: 245 KELEAPQHWSEMRCPQLANLGSGRFCIARFFHTWTTPMEPNSFGYDS-IKVHSFSDFDSD 303
Query: 472 TKSV 483
+ S+
Sbjct: 304 SDSI 307
>01_06_1201 - 35380338-35380496,35381200-35381322,35381521-35382066,
35382285-35382392,35382695-35383225,35383614-35383743,
35384225-35385081,35385303-35385408,35387119-35387230,
35389255-35389347,35389723-35389771,35389859-35389897,
35390671-35390757,35391613-35391873,35391957-35392166,
35392413-35393507
Length = 1501
Score = 31.1 bits (67), Expect = 0.49
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 93 EKYPHQA---WRFFGYRYRILKHQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQE 251
EKYP A RF G+R R+L + L E+G I +E+RK +FL+E
Sbjct: 1213 EKYPVMAELIHRFQGFRERLLADPKFLHRLAIEEGISITTTLIAQYEKRKGRFLEE 1268
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 30.3 bits (65), Expect = 0.86
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 355 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEK 465
D K +++RFD+ + EE+ V D+ L++ +H+++
Sbjct: 140 DDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKE 176
>07_03_0943 -
22778877-22780970,22781376-22781480,22781481-22782059,
22782149-22782187,22782340-22782372
Length = 949
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 141 ILKHQRALRCRNEEDGRRNEQIQIRTH 221
+ K +R + C+NE GRRN R H
Sbjct: 629 VAKRRRLVSCKNERTGRRNTAANKRQH 655
>03_05_0520 +
25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/31 (29%), Positives = 24/31 (77%)
Frame = +1
Query: 127 VIDTEFSSIRERFDAEMRKMEEEMSKFRSEL 219
V DTE ++ +E+F+A+++K +++ ++R ++
Sbjct: 18 VYDTENANQKEKFEADLKKEIKKLQRYRDQI 48
>01_01_0128 -
1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 135 YRILKHQRALRCRNEEDGRRNEQIQIRTHEQRK 233
Y L+ QR R R EE+ R+ E+ + R +RK
Sbjct: 837 YLNLEEQRLQRLREEEEARKQEERRKREETERK 869
>07_01_0886 -
7356591-7356662,7357002-7357079,7357373-7357444,
7357511-7357600,7357669-7357783,7358509-7358639,
7358717-7358992,7360147-7360283,7360368-7360502,
7360958-7361325,7362111-7362229,7362295-7362339
Length = 545
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 76 ADSGLKRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEE 195
A S + ++P+ L D S +E S++R DA K EE+
Sbjct: 52 ASSSRRSSVPLPLPDPSSSRSETSAVRSEGDAAEEKSEEQ 91
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 298 LAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLL 441
L S D L + + +GK K + Q P+EIVV V +LL
Sbjct: 99 LVHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLL 146
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 27.1 bits (57), Expect = 8.0
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = +1
Query: 139 EFSSIRERFDAEMRKME---EEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 309
E +S+ + +++++E EE ++L + SN+ K HS S++ +
Sbjct: 759 EVTSLERKIQIQVQELEQKREEADAMHAQLQDERSNHMQKEAALRALENLHSQSQEEVKQ 818
Query: 310 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEI--VVKTVDNKLLVHAKHEEK 465
D +S + + LKL D+SQ + + + D+ LL K EK
Sbjct: 819 MARDVEHSNKKLSDLENNNLKLH-DLSQGLKKTVAELNSMKDSALLQQQKSSEK 871
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +1
Query: 352 GDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKS 468
G GK L R+D++Q P + + + V + + + E ++
Sbjct: 979 GSGKDLNSRYDIAQKLPSQRITRDVPSPVFAWSPSESRT 1017
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,535,270
Number of Sequences: 37544
Number of extensions: 176039
Number of successful extensions: 589
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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