Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0195
(485 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 33 0.16
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 33 0.16
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 33 0.16
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 31 0.38
SB_45697| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.38
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 30 0.88
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 30 1.2
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 30 1.2
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 29 2.0
SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11) 29 2.7
SB_16838| Best HMM Match : TolA (HMM E-Value=2) 28 3.6
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 28 4.7
SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07) 28 4.7
SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23) 28 4.7
SB_10476| Best HMM Match : Lactamase_B (HMM E-Value=7.4e-08) 27 6.2
SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61) 27 8.2
SB_8330| Best HMM Match : Spb1_C (HMM E-Value=5.3) 27 8.2
SB_25665| Best HMM Match : TolA (HMM E-Value=1.7) 27 8.2
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 343 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 459
+ +GD K + DV+ + P+ I V+ + N+LLV A HE
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHE 129
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 343 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 459
+ +GD K + DV+ + P+ I V+ + N+LLV A HE
Sbjct: 326 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHE 363
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 343 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 459
+ +GD K + DV+ + P+ I V+ + N+LLV A HE
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHE 129
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 343 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 459
+ +GD K + DV+ + P+ I V+ + N+LLV A HE
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHE 129
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 343 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 459
+ +GD K + DV+ + P+ I V+ + N+LLV A HE
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHE 129
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 373 LRFDVSQYTPEEIVVKTVDNKLLVHAKHE 459
+ DV+ + PE I V+ + N+LLV+A HE
Sbjct: 100 MAIDVAGFPPESIKVQVLGNELLVNANHE 128
>SB_45697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 31.5 bits (68), Expect = 0.38
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 130 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQL 300
++ E SS+RE DA RKM ++SK +L +E+N + QHSD+ +L
Sbjct: 255 LEKEISSLREIVDARERKM-VQLSKDNIDL--QETNAILRSQLEQLESMQHSDNAEL 308
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 30.3 bits (65), Expect = 0.88
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 349 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 459
E + DV + PE I V+ + N+LLV A HE
Sbjct: 93 ESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHE 129
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 355 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 459
D L DVS + PEE+ VK ++L V A+ E
Sbjct: 24 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE 58
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 355 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 459
D L DVS + PEE+ VK ++L V A+ E
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE 130
>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 84 WSQEKYPHQAWRFFGYRY-RILKHQRALRCRNEEDGRRNEQIQI-RTHEQRKQQFLQE 251
W Q+ PH GYRY + +KH + R R + Q+QI R E+RKQ L +
Sbjct: 127 WQQKYGPHYKKLDLGYRYLKRIKHVSFDQIRE----RASAQLQIERERERRKQDLLMK 180
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 349 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 471
EGD K DV Y PEEI +K ++ + KH+ + +
Sbjct: 36 EGD-KVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKSEGE 75
>SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11)
Length = 672
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 85 GLKRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRES 234
G K+N K S D+ S++ FD+E K+ E FR++ NR+S
Sbjct: 52 GKKKNGAAKGKIVSKSDSLRSALSFDFDSETEKIRREYEVFRAQQANRDS 101
>SB_16838| Best HMM Match : TolA (HMM E-Value=2)
Length = 371
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 57 ANNVKNG*QWSQEKYPHQAWRFFGYRYRIL-KHQRALRCRNEEDGRRNEQIQIRTHEQRK 233
+ N N Q Q+K Q R + Y + K Q+ + R ++ +R +Q Q +QR+
Sbjct: 28 SRNNSNNVQLQQQKRQQQQKRTYNYDIQQQQKRQQQQQKRQQQKQKRQQQEQKLQQQQRR 87
Query: 234 QQ 239
QQ
Sbjct: 88 QQ 89
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 286 DSRQLAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEE 408
DS + E + WD+ + D+GD KT++ D S Y E
Sbjct: 1566 DSHEGKEKNEWDNYDGD--NDDGDSKTIEANKDKSVYHHSE 1604
>SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)
Length = 1127
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 111 AWRFFGYRYRILKHQRALRCRNEEDGRRNEQIQIRTHEQR 230
+WR G + +L+ + + CRN+ R EQI +R H R
Sbjct: 592 SWRL-GTSFFLLEDGKVI-CRNDYGDRDEEQIVLRVHHMR 629
>SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)
Length = 1024
Score = 27.9 bits (59), Expect = 4.7
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +1
Query: 49 STRQIT*KMADSGLKRNIPIK----LGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSE 216
S R+I K DS KR I + + DF V E S+ + D EMRK + + + +
Sbjct: 551 SNREIQEKQEDSE-KRLIDLPPTPDIMDFKVKSAEIKSLAKSVDNEMRKFQVQQANEHIK 609
Query: 217 LMN 225
++N
Sbjct: 610 MLN 612
>SB_10476| Best HMM Match : Lactamase_B (HMM E-Value=7.4e-08)
Length = 866
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +2
Query: 401 PKRSLLRLSTTNYWSMPNTRRNL 469
P+RS+ R++ +YW+ PN+ ++L
Sbjct: 58 PRRSVFRVTCRHYWNGPNSCQSL 80
>SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61)
Length = 315
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 148 SIRERFDAEMRKMEEEMSKFRSELMN 225
S RE+ +AE ++ EM + RS++MN
Sbjct: 78 STREKLEAEHTQVNREMVELRSKIMN 103
>SB_8330| Best HMM Match : Spb1_C (HMM E-Value=5.3)
Length = 230
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 91 KRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSE 216
K N I L D SS+RE+ A MRKM+ E + R+E
Sbjct: 139 KDNDNISLDDLKPFKVP-SSMREKMKAYMRKMKREALRRRAE 179
>SB_25665| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 697
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 126 GYRYRILKHQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQEH 254
GY + + R R E+ +R +Q ++ H Q++QQ L H
Sbjct: 204 GYTEQWHQDNRERYDRREKAAQRQQQQHLQQHRQQQQQRLDRH 246
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,513,094
Number of Sequences: 59808
Number of extensions: 211653
Number of successful extensions: 841
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1026164244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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