Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0195
         (485 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29612-7|AAO61437.1|  205|Caenorhabditis elegans Heat shock prot...    93   1e-19
U29612-6|AAA68804.1|  219|Caenorhabditis elegans Heat shock prot...    93   1e-19
U29612-8|AAW57827.1|  108|Caenorhabditis elegans Heat shock prot...    89   2e-18
U41109-5|AAB37035.1|  149|Caenorhabditis elegans Heat shock prot...    43   1e-04
U41109-4|AAQ62453.1|  148|Caenorhabditis elegans Heat shock prot...    43   1e-04
L15188-10|AAA27953.1|  110|Caenorhabditis elegans Heat shock pro...    39   0.002
U39645-6|AAA80366.1|  368|Caenorhabditis elegans Heat shock prot...    38   0.005
AC024830-3|AAF59604.3|  180|Caenorhabditis elegans Hypothetical ...    36   0.012
AC024772-2|AAF60537.2|  756|Caenorhabditis elegans Osm-9 and cap...    28   3.1  
U53180-6|AAA96288.1|  202|Caenorhabditis elegans Hypothetical pr...    28   4.1  
M14334-1|AAA28070.1|  144|Caenorhabditis elegans protein ( C.ele...    28   4.1  
K03273-3|AAA28067.1|  144|Caenorhabditis elegans heat shock prot...    28   4.1  
U08022-1|AAA17722.1|  515|Caenorhabditis elegans STE12 transcrip...    27   5.5  
AL110501-6|CAH19094.1|  466|Caenorhabditis elegans Hypothetical ...    27   5.5  
AL110501-5|CAB54505.1|  552|Caenorhabditis elegans Hypothetical ...    27   5.5  
AC006620-3|AAF39779.2|  579|Caenorhabditis elegans Hypothetical ...    27   5.5  
Z35640-2|CAA84703.1|  159|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AC006708-4|AAF60416.2|  250|Caenorhabditis elegans Proteasome al...    27   9.5  

>U29612-7|AAO61437.1|  205|Caenorhabditis elegans Heat shock protein
           protein 25,isoform b protein.
          Length = 205

 Score = 92.7 bits (220), Expect = 1e-19
 Identities = 59/161 (36%), Positives = 89/161 (55%), Gaps = 30/161 (18%)
 Frame = +1

Query: 91  KRNIPIKLGDFSVIDTEFSSIRERFDAE-------MRKMEEEMSKFR------SELMNRE 231
           +R I +   ++SVID EF ++R+RF+ E       M+++  E   +R      + + N+ 
Sbjct: 3   ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSEFEGYRPNGGPPAAISNQP 62

Query: 232 SNNFFKXXXXXXXXXQ-------------HSDSRQLAE-PSH---WDSLNSPLIQDEGDG 360
            N +           +             H  S  +A  P++    D+L SPLI+DE DG
Sbjct: 63  YNAYSNTSSHHETSNRTGGFGSPLPPPSFHGPSDLMAHRPTYDPYLDNLKSPLIKDESDG 122

Query: 361 KTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSV 483
           KTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+  ++V
Sbjct: 123 KTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTV 163


>U29612-6|AAA68804.1|  219|Caenorhabditis elegans Heat shock protein
           protein 25,isoform a protein.
          Length = 219

 Score = 92.7 bits (220), Expect = 1e-19
 Identities = 59/161 (36%), Positives = 89/161 (55%), Gaps = 30/161 (18%)
 Frame = +1

Query: 91  KRNIPIKLGDFSVIDTEFSSIRERFDAE-------MRKMEEEMSKFR------SELMNRE 231
           +R I +   ++SVID EF ++R+RF+ E       M+++  E   +R      + + N+ 
Sbjct: 17  ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSEFEGYRPNGGPPAAISNQP 76

Query: 232 SNNFFKXXXXXXXXXQ-------------HSDSRQLAE-PSH---WDSLNSPLIQDEGDG 360
            N +           +             H  S  +A  P++    D+L SPLI+DE DG
Sbjct: 77  YNAYSNTSSHHETSNRTGGFGSPLPPPSFHGPSDLMAHRPTYDPYLDNLKSPLIKDESDG 136

Query: 361 KTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSV 483
           KTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+  ++V
Sbjct: 137 KTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTV 177


>U29612-8|AAW57827.1|  108|Caenorhabditis elegans Heat shock protein
           protein 25,isoform c protein.
          Length = 108

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 38/55 (69%), Positives = 48/55 (87%)
 Frame = +1

Query: 319 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSV 483
           D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+  ++V
Sbjct: 12  DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTV 66


>U41109-5|AAB37035.1|  149|Caenorhabditis elegans Heat shock protein
           protein 17,isoform a protein.
          Length = 149

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +1

Query: 382 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 471
           DVSQ+ PEE+ V  VDN+L++  KH EK+D
Sbjct: 62  DVSQFEPEELKVNIVDNQLIIEGKHNEKTD 91


>U41109-4|AAQ62453.1|  148|Caenorhabditis elegans Heat shock protein
           protein 17,isoform b protein.
          Length = 148

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +1

Query: 382 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 471
           DVSQ+ PEE+ V  VDN+L++  KH EK+D
Sbjct: 61  DVSQFEPEELKVNIVDNQLIIEGKHNEKTD 90


>L15188-10|AAA27953.1|  110|Caenorhabditis elegans Heat shock
           protein protein 12.2 protein.
          Length = 110

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = +1

Query: 310 SHWD---SLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 471
           S WD     N  +++     +  ++  DV  +TP+EI VK    +LL+H +HE +SD
Sbjct: 12  STWDWPLQHNDGVVKVHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSD 68


>U39645-6|AAA80366.1|  368|Caenorhabditis elegans Heat shock protein
           protein 43 protein.
          Length = 368

 Score = 37.5 bits (83), Expect = 0.005
 Identities = 17/49 (34%), Positives = 30/49 (61%)
 Frame = +1

Query: 325 LNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 471
           +NS ++ D+   +   +  D  Q+ PEEI VKT+D+ L++  +HE+  D
Sbjct: 103 VNSNVVNDD---RRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRD 148


>AC024830-3|AAF59604.3|  180|Caenorhabditis elegans Hypothetical
           protein Y55F3BR.6 protein.
          Length = 180

 Score = 36.3 bits (80), Expect = 0.012
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +1

Query: 298 LAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDT 474
           ++ PS   S N  L        +     DVS+Y  + + V  VDN ++V   H EK DT
Sbjct: 58  ISSPSVVGSQNGNLTSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDT 116


>AC024772-2|AAF60537.2|  756|Caenorhabditis elegans Osm-9 and
           capsaicin receptor-relatedprotein 4 protein.
          Length = 756

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 157 ERFDAEMRKMEEEMSKFRSELMNRE 231
           E F+ + +KM EE  KFR EL   +
Sbjct: 701 EEFECQRKKMHEERRKFREELRTNQ 725


>U53180-6|AAA96288.1|  202|Caenorhabditis elegans Hypothetical
           protein D1014.4 protein.
          Length = 202

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 23/89 (25%), Positives = 40/89 (44%)
 Frame = +2

Query: 203 NSDQNS*TEKATISSRAQLARRHLHSTVTADSLLSPVTGIA*TRRSFKTRVTARLSSFAL 382
           +++  S  E  TIS  +Q+A + L   V+      PV+    +R  F        +SF  
Sbjct: 113 SNELQSVQELRTISGESQMAEQALDYIVSKTFKKIPVSSQKMSRDIFNVCFVFSNNSFIQ 172

Query: 383 MSASILPKRSLLRLSTTNYWSMPNTRRNL 469
            +   +  R +L +S+ N  S+P T+  L
Sbjct: 173 STRDAINYRQILVISSLNDISVPLTQDEL 201


>M14334-1|AAA28070.1|  144|Caenorhabditis elegans protein (
           C.elegans heat shockprotein genes 16-41 and 16-2,
           complete cds, flanked byCeRep16 repetitive elements. ).
          Length = 144

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +1

Query: 319 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 471
           D++   ++ DE       ++ DVS + PE + +K    +L +    E KS+
Sbjct: 42  DNIGEQIVNDESK---FSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSE 89


>K03273-3|AAA28067.1|  144|Caenorhabditis elegans heat shock protein
           16-48a protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = +1

Query: 319 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 471
           D++   ++ DE       ++ DVS + PE++ ++    +L +    E+KS+
Sbjct: 42  DNIGEQIVNDESK---FSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSE 89


>U08022-1|AAA17722.1|  515|Caenorhabditis elegans STE12
           transcriptional activator protein.
          Length = 515

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 147 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 254
           + Q A R R EE+ RR  E  Q    +QR Q F Q+H
Sbjct: 194 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 230


>AL110501-6|CAH19094.1|  466|Caenorhabditis elegans Hypothetical
           protein Y79H2A.1b protein.
          Length = 466

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 147 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 254
           + Q A R R EE+ RR  E  Q    +QR Q F Q+H
Sbjct: 145 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 181


>AL110501-5|CAB54505.1|  552|Caenorhabditis elegans Hypothetical
           protein Y79H2A.1a protein.
          Length = 552

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 147 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 254
           + Q A R R EE+ RR  E  Q    +QR Q F Q+H
Sbjct: 231 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 267


>AC006620-3|AAF39779.2|  579|Caenorhabditis elegans Hypothetical
           protein C51G7.4 protein.
          Length = 579

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 147 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 254
           + Q A R R EE+ RR  E  Q    +QR Q F Q+H
Sbjct: 258 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 294


>Z35640-2|CAA84703.1|  159|Caenorhabditis elegans Hypothetical
           protein F43D9.4 protein.
          Length = 159

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +1

Query: 349 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 471
           E   +   ++ DV+ + PEE+ V    + L +   HE K++
Sbjct: 47  ENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVKTE 87


>AC006708-4|AAF60416.2|  250|Caenorhabditis elegans Proteasome alpha
           subunit protein 3 protein.
          Length = 250

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = +1

Query: 286 DSRQLAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEK 465
           +++QLA    W +L+  L  ++ +   L  R    +   EE+  K VD  +  H K E++
Sbjct: 186 EAKQLAIKVLWKTLDVKLASEKVEMAVLTRRD--GKTVLEELTTKEVDALIAEHEKKEKE 243

Query: 466 SDT 474
           ++T
Sbjct: 244 AET 246


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,313,278
Number of Sequences: 27780
Number of extensions: 163135
Number of successful extensions: 668
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)