Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0194
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    31   0.006
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 31.1 bits (67), Expect = 0.006
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 116  NRKCFREGESRRAPSAGPMLPVAAVTRRTSRTV 214
            N +C  +  S  APS  PM+P   VT  TSR +
Sbjct: 2281 NTECHPDASSTMAPSTTPMVPDKPVTTTTSRPI 2313


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -2

Query: 284 ELLAVLNSSGA 252
           ELLA+L SSGA
Sbjct: 105 ELLAILGSSGA 115


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -2

Query: 284 ELLAVLNSSGA 252
           ELLA+L SSGA
Sbjct: 105 ELLAILGSSGA 115


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
 Frame = -1

Query: 90  PRCPSGTPSMSPQ----KGSPASQP 28
           PRCPSG   +S +    +G P   P
Sbjct: 96  PRCPSGESMLSERAALLRGVPTLSP 120


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 317 GNIGPLKTSATELLAVLNSSG 255
           GNI PL TSA  +   L   G
Sbjct: 50  GNIPPLYTSAENIFKQLREWG 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,355
Number of Sequences: 336
Number of extensions: 2567
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)