Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0194
         (504 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    33   0.089
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    33   0.089
Z81567-5|CAB04588.2|  154|Caenorhabditis elegans Hypothetical pr...    30   0.83 
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr...    28   4.4  
U41535-14|AAB63404.1|  169|Caenorhabditis elegans Hypothetical p...    27   5.8  
U39644-7|AAO44908.1|  307|Caenorhabditis elegans Collagen protei...    27   5.8  
AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical ...    27   5.8  
Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical...    27   7.7  
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical...    27   7.7  
AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic catio...    27   7.7  

>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 33.5 bits (73), Expect = 0.089
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -1

Query: 168 GPADGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPA 37
           GPA GA   +PSR     +  +P +T R P+ TP+  P + +P+
Sbjct: 14  GPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPS 57


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 33.5 bits (73), Expect = 0.089
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -1

Query: 168 GPADGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPA 37
           GPA GA   +PSR     +  +P +T R P+ TP+  P + +P+
Sbjct: 143 GPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPS 186


>Z81567-5|CAB04588.2|  154|Caenorhabditis elegans Hypothetical
           protein K08C9.7 protein.
          Length = 154

 Score = 30.3 bits (65), Expect = 0.83
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -1

Query: 141 SPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYTLNR 13
           SPS K+F     E G   R P+G P++S Q+ +  +QP TL +
Sbjct: 107 SPSPKYFKID--ENGKISRLPTGIPTVSIQREAFMTQPTTLRK 147


>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
           protein K08E4.1 protein.
          Length = 1208

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 356 KFRMWKQIKLNHLGNIGPLKTSATELLAVLNSSGAPN 246
           +F+    ++L+H GN+G +     E L VLN  G  N
Sbjct: 534 QFQYHDLVQLDHTGNVGVIVRLEKEHLEVLNMHGVVN 570


>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
           protein K08E4.1 protein.
          Length = 1208

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 356 KFRMWKQIKLNHLGNIGPLKTSATELLAVLNSSGAPN 246
           +F+    ++L+H GN+G +     E L VLN  G  N
Sbjct: 534 QFQYHDLVQLDHTGNVGVIVRLEKEHLEVLNMHGVVN 570


>U41535-14|AAB63404.1|  169|Caenorhabditis elegans Hypothetical
           protein F18A1.8 protein.
          Length = 169

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -1

Query: 177 GSMGPADGALLLS---PSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPAS 34
           G+  P    L LS   P+ + FL   ++  S     SG+P ++PQK +P S
Sbjct: 101 GTGSPLSAGLSLSNPLPAGRGFLSPAIQNTSNQFTFSGSPRITPQKHTPVS 151


>U39644-7|AAO44908.1|  307|Caenorhabditis elegans Collagen protein
           171 protein.
          Length = 307

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
 Frame = -1

Query: 183 ATGSMGPADGALLLSPSRKHFLFICVE--PGST----PRCPSGTPSMSPQKGSPASQPY 25
           A G+ GP DG      S   F F C    PG      P+ P+G P    Q G+P +  +
Sbjct: 140 APGTNGP-DGRPATQASASDFCFDCPPGPPGPAGSIGPKGPNGNPGFDGQPGAPGNNGF 197


>AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical
           protein C02B10.5 protein.
          Length = 698

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 18/65 (27%), Positives = 27/65 (41%)
 Frame = -1

Query: 210 VREVRLVTAATGSMGPADGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQ 31
           +R+++   AA GSM P+  +    P   H+      PG  P  P G P  +     P   
Sbjct: 379 MRQMQQAAAAAGSMPPSYPSPGQYPGPMHY------PGMPPMMPPGAPFSAGASYPPMGG 432

Query: 30  PYTLN 16
           P+  N
Sbjct: 433 PFPPN 437


>Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical
           protein F52F12.1a protein.
          Length = 585

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 405 IDVVFNHSNASESDQTKVQNVETN*IKSPRKHR 307
           +D + NH NA+E  +TK  +  T+  K+P   R
Sbjct: 326 VDSMKNHQNAAEEKETKRSHNVTDLFKTPNLRR 358


>Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical
           protein F52F12.1b protein.
          Length = 568

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 405 IDVVFNHSNASESDQTKVQNVETN*IKSPRKHR 307
           +D + NH NA+E  +TK  +  T+  K+P   R
Sbjct: 309 VDSMKNHQNAAEEKETKRSHNVTDLFKTPNLRR 341


>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17b protein.
          Length = 1467

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = +2

Query: 44  DPFCGDIDGVPLGQRGVLPGSTQINRKCFREGESRRAPSAGPMLPVAAVTRRTSRTVPHT 223
           D F  + + V +G+RG+LP +  +N       ES   PS       A V  RT  T P  
Sbjct: 105 DGFLVNDNAVQIGRRGLLPEAHLVNLHV--SAESPMKPSFTTDFSEADVRFRTPATAPKA 162

Query: 224 YPSSVTLNSEPR 259
             S+  ++   R
Sbjct: 163 ATSNYAVSPYAR 174


>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17a protein.
          Length = 1538

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = +2

Query: 44  DPFCGDIDGVPLGQRGVLPGSTQINRKCFREGESRRAPSAGPMLPVAAVTRRTSRTVPHT 223
           D F  + + V +G+RG+LP +  +N       ES   PS       A V  RT  T P  
Sbjct: 105 DGFLVNDNAVQIGRRGLLPEAHLVNLHV--SAESPMKPSFTTDFSEADVRFRTPATAPKA 162

Query: 224 YPSSVTLNSEPR 259
             S+  ++   R
Sbjct: 163 ATSNYAVSPYAR 174


>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17b protein.
          Length = 1467

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = +2

Query: 44  DPFCGDIDGVPLGQRGVLPGSTQINRKCFREGESRRAPSAGPMLPVAAVTRRTSRTVPHT 223
           D F  + + V +G+RG+LP +  +N       ES   PS       A V  RT  T P  
Sbjct: 105 DGFLVNDNAVQIGRRGLLPEAHLVNLHV--SAESPMKPSFTTDFSEADVRFRTPATAPKA 162

Query: 224 YPSSVTLNSEPR 259
             S+  ++   R
Sbjct: 163 ATSNYAVSPYAR 174


>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17a protein.
          Length = 1538

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = +2

Query: 44  DPFCGDIDGVPLGQRGVLPGSTQINRKCFREGESRRAPSAGPMLPVAAVTRRTSRTVPHT 223
           D F  + + V +G+RG+LP +  +N       ES   PS       A V  RT  T P  
Sbjct: 105 DGFLVNDNAVQIGRRGLLPEAHLVNLHV--SAESPMKPSFTTDFSEADVRFRTPATAPKA 162

Query: 224 YPSSVTLNSEPR 259
             S+  ++   R
Sbjct: 163 ATSNYAVSPYAR 174


>AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic cation
           transporter 1 protein.
          Length = 568

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 405 IDVVFNHSNASESDQTKVQNVETN*IKSPRKHR 307
           +D + NH NA+E  +TK  +  T+  K+P   R
Sbjct: 309 VDSMKNHQNAAEEKETKRSHNVTDLFKTPNLRR 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,072,654
Number of Sequences: 27780
Number of extensions: 258261
Number of successful extensions: 831
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)