Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0194
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.6  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   9.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.6  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 214 NSARGASSHRRYRQHGSSGW 155
           N++RG S       HGS  W
Sbjct: 392 NNSRGHSGQSSSHHHGSKSW 411


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 216 HIPTHHQLP*IRSPAAVEHSQQ 281
           H  +HH L    SP++V+  QQ
Sbjct: 806 HQQSHHGLHINSSPSSVQSGQQ 827


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 247 FGAPLLLSTANNSV 288
           FG  LLL+ A+NSV
Sbjct: 13  FGVLLLLTNADNSV 26


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 81  PSGTPSMSPQKGSPASQPY 25
           P+ TP  S + G P S  +
Sbjct: 889 PASTPGCSSKNGEPTSAAF 907


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,211
Number of Sequences: 438
Number of extensions: 2824
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)