Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0193
         (334 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   1.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   2.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   3.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    20   7.8  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 4   IVYFTCSVV--CVCVYSIAFNINLMTLKYRYKIEL 102
           I  F C+++  C CV S A  +     K R+K +L
Sbjct: 246 IFLFNCTLIIMCDCVRSEASKVVKNAQKLRHKFDL 280


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 188 RNNRI*YF*KLFETETRNFTS 250
           R+N I  F K+ +   RNFT+
Sbjct: 288 RDNEIKMFVKIVDASCRNFTA 308


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = -3

Query: 224 QIVSKNIKYGCFSTIVFCSAACANFGDASNVY 129
           Q+ +K IK+  F  +    +   +FG A   +
Sbjct: 347 QVSNKKIKFSSFGMLKISRSLLTSFGGALTTF 378


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 10  YFTCSVVCVCVYSIAFNINLM 72
           YF C +VC+       NINL+
Sbjct: 160 YFLCVIVCIFRGKYR-NINLL 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,043
Number of Sequences: 336
Number of extensions: 1012
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)