Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0193
         (334 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78062-5|CAB01500.1|  516|Caenorhabditis elegans Hypothetical pr...    28   1.9  
AL021571-7|CAA16515.1|  516|Caenorhabditis elegans Hypothetical ...    28   1.9  
AF016451-9|AAB66005.2|  524|Caenorhabditis elegans Udp-glucurono...    27   4.3  
U50309-2|AAG24136.2|  334|Caenorhabditis elegans Seven tm recept...    26   5.7  
AC006762-10|AAF60556.1|  301|Caenorhabditis elegans Hypothetical...    26   7.5  
AC006720-6|AAF60450.1|  346|Caenorhabditis elegans Hypothetical ...    26   7.5  

>Z78062-5|CAB01500.1|  516|Caenorhabditis elegans Hypothetical
           protein F16D3.7 protein.
          Length = 516

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 1   EIVYFTCSVVCVCVYSIAFNINLMTLKYRYKIELIMRLNYISA*TL 138
           ++ + TCSVV +CV S+   +  +T   RYK  ++ +   IS  T+
Sbjct: 140 DVTFCTCSVVTICVISVDRYL-AVTRPLRYK-SIVTKTKVISVMTI 183


>AL021571-7|CAA16515.1|  516|Caenorhabditis elegans Hypothetical
           protein F16D3.7 protein.
          Length = 516

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 1   EIVYFTCSVVCVCVYSIAFNINLMTLKYRYKIELIMRLNYISA*TL 138
           ++ + TCSVV +CV S+   +  +T   RYK  ++ +   IS  T+
Sbjct: 140 DVTFCTCSVVTICVISVDRYL-AVTRPLRYK-SIVTKTKVISVMTI 183


>AF016451-9|AAB66005.2|  524|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein51 protein.
          Length = 524

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 209 NIKYGCFSTIVFCSAACANF 150
           NI+Y C  TIVF + +C  F
Sbjct: 481 NIEYYCVDTIVFIAFSCVTF 500


>U50309-2|AAG24136.2|  334|Caenorhabditis elegans Seven tm receptor
           protein 146 protein.
          Length = 334

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -3

Query: 239 FWFLFQIVSKNIKYG-CFSTIVFCSA 165
           FW L  +V+  +  G CF+ IVFC+A
Sbjct: 194 FWDLMLLVACILTIGGCFAIIVFCAA 219


>AC006762-10|AAF60556.1|  301|Caenorhabditis elegans Hypothetical
           protein Y42G9A.1 protein.
          Length = 301

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 127 RLYNLISLLIQFCIYISM 74
           RL+ L  +L QFC YISM
Sbjct: 203 RLHTLTQILNQFCNYISM 220


>AC006720-6|AAF60450.1|  346|Caenorhabditis elegans Hypothetical
           protein Y17G9B.9 protein.
          Length = 346

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +1

Query: 94  IELIMRLNYISA*TLDASPKFAQAAEQNTIV--EKQPYLIFLETI*NRNQKFH*YD 255
           +EL+   NY S   +D +PK        TI+  E    L  ++T+   N +   YD
Sbjct: 56  VELVEDENYCSVHRIDETPKLVDKKPSKTIIRDEAVKVLRHIQTVPIENLRLKRYD 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,792,355
Number of Sequences: 27780
Number of extensions: 85873
Number of successful extensions: 200
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)