Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0192
(555 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 104 4e-23
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 104 4e-23
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 101 5e-22
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 101 5e-22
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 97 1e-20
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 76 2e-14
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 75 5e-14
07_03_0767 - 21360999-21361157,21361185-21361274,21361413-213615... 29 3.3
05_02_0090 + 6507378-6507481,6507495-6507627,6507658-6507715,650... 29 3.3
07_03_0993 - 23182070-23182615 27 7.6
07_01_0921 + 7753744-7753821,7753921-7754856,7755285-7755377,775... 27 7.6
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 27 7.6
>07_01_1146 + 10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 104 bits (250), Expect = 4e-23
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Frame = +3
Query: 78 VIEGSMKIHAQYHYTMETQTSVATPTEDG-LEIYSSTQWLDLTNIAIAKCLDMPVNSINI 254
++ +K+ +QY++ METQT++A P ED + +YSS+Q+ +L I+KCL +P N++ +
Sbjct: 761 IMSEEVKLASQYYFYMETQTALAIPDEDNTMTVYSSSQFPELAQNVISKCLGIPFNNVRV 820
Query: 255 IVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIG 434
I RR GGG+G K R+ IA AAAL L R R L T+M +G R P + +G
Sbjct: 821 ITRRAGGGFGGKAVRSLHIATAAALCAHTLRRPVRMYLNRNTDMIMVGGRHPMKARYSVG 880
Query: 435 VNKAGRIQNLKNTFYQDGGCS 497
G+I L + G S
Sbjct: 881 FKSDGKITALHLDLLINAGIS 901
>03_06_0253 - 32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 104 bits (250), Expect = 4e-23
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Frame = +3
Query: 78 VIEGSMKIHAQYHYTMETQTSVATPTEDG-LEIYSSTQWLDLTNIAIAKCLDMPVNSINI 254
+I+G +K+ +QY++ METQT++A P ED + +Y S Q ++T +A+CL +P +++ I
Sbjct: 763 IIDGEVKLESQYYFYMETQTALAIPDEDNCITLYVSAQLPEITQNTVARCLGIPYHNVRI 822
Query: 255 IVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIG 434
I RR+GGG+G K +A +A A A+ L R R L +T+M G R P ++ +G
Sbjct: 823 ITRRVGGGFGGKAMKAIHVAAACAVAAFKLRRPVRMYLDRKTDMIMAGGRHPMKVKYSVG 882
Query: 435 VNKAGRIQNLKNTFYQDGGCS 497
G+I L +GG S
Sbjct: 883 FKSDGKITGLHFDLGMNGGIS 903
>10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 101 bits (241), Expect = 5e-22
Identities = 48/130 (36%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Frame = +3
Query: 78 VIEGSMKIHAQYHYTMETQTSVATPTEDG-LEIYSSTQWLDLTNIAIAKCLDMPVNSINI 254
+I+G +K+ +QY++ METQT++A P ED + +Y S Q ++T +A+CL +P +++ I
Sbjct: 756 IIDGEVKLGSQYYFYMETQTALAFPDEDNCITVYCSAQMPEVTQDIVARCLGVPFHNVRI 815
Query: 255 IVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIG 434
I RR+GGG+G K +A+ +A A A+ L R R L +T+M G R P ++ +G
Sbjct: 816 ITRRVGGGFGGKAMKATHVATACAVAAFKLRRPVRMYLDRKTDMIMAGGRHPMKAKYSVG 875
Query: 435 VNKAGRIQNL 464
G+I L
Sbjct: 876 FKSDGKITAL 885
>03_06_0252 - 32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 101 bits (241), Expect = 5e-22
Identities = 48/130 (36%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Frame = +3
Query: 78 VIEGSMKIHAQYHYTMETQTSVATPTEDG-LEIYSSTQWLDLTNIAIAKCLDMPVNSINI 254
+I+G +K+ +QY++ METQT++A P ED + +Y S Q ++T +A+CL +P +++ I
Sbjct: 764 IIDGEVKLESQYYFYMETQTALAIPDEDNCITLYVSAQLPEITQNTVARCLGIPYHNVRI 823
Query: 255 IVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIG 434
I RR+GGG+G K +A +A A A+ L R R L +T+M G R P ++ +G
Sbjct: 824 ITRRVGGGFGGKAMKAIHVATACAVAAFKLRRPVRMYLDRKTDMIMAGGRHPMKVKYSVG 883
Query: 435 VNKAGRIQNL 464
G+I L
Sbjct: 884 FKSDGKITGL 893
>07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 96.7 bits (230), Expect = 1e-20
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Frame = +3
Query: 93 MKIHAQYHYTMETQTSVATPTEDG-LEIYSSTQWLDLTNIAIAKCLDMPVNSINIIVRRL 269
+ +H+QY++ METQT++A P ED + +YSS+Q ++ IAKCL +P +++ +I RR+
Sbjct: 823 VNLHSQYYFYMETQTALAIPEEDNCMVVYSSSQCPEVAQETIAKCLGLPCHNVRVITRRV 882
Query: 270 GGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIGVNKAG 449
GGG+G K R+ +A A AL L R R L +T+M G R P + +G G
Sbjct: 883 GGGFGGKAVRSLPVATACALSAFKLQRPVRIYLDRKTDMIMTGGRHPMKIRYSVGFKSDG 942
Query: 450 RIQNL 464
I L
Sbjct: 943 NITAL 947
>03_04_0157 + 17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 76.2 bits (179), Expect = 2e-14
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Frame = +3
Query: 78 VIEGSMKIHAQYHYTMETQTSVATPTEDGLEIY--SSTQWLDLTNIA-IAKCLDMPVNSI 248
+IEG +++ Q H+ ME Q+++ P + G EI+ SSTQ + +A L +P + +
Sbjct: 780 IIEGKVQVGGQEHFYMEPQSTLVWPVDSGNEIHMISSTQKAPQKHQKYVANVLGLPQSRV 839
Query: 249 NIIVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFE 428
+R+GGG+G K TR++ A AA++ L + + +L +M G+R +++
Sbjct: 840 VCKTKRIGGGFGGKETRSAIFAAAASVAAYCLRQPVKLVLDRDIDMMTTGQRHSFLGKYK 899
Query: 429 IGVNKAGRIQNLKNTFYQDGGCSFNEVLTPL--TVKHFQNCYD 551
+G G+I L Y +GG S + L L + H N YD
Sbjct: 900 VGFTDDGKILALDLDVYNNGGHSHDLSLPVLERAMFHSDNVYD 942
>07_01_1149 +
10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 74.5 bits (175), Expect = 5e-14
Identities = 31/73 (42%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 75 TVIEGSMKIHAQYHYTMETQTSVATPTEDG-LEIYSSTQWLDLTNIAIAKCLDMPVNSIN 251
++ +K+ +QY++ METQT++A P ED + +YSS+Q+ +L I+KCL +P N++
Sbjct: 671 SITSSHVKLSSQYYFYMETQTALAIPDEDNTMTVYSSSQFSELAQNVISKCLGIPFNNVR 730
Query: 252 IIVRRLGGGYGSK 290
+I RR GGG+G K
Sbjct: 731 VITRRAGGGFGGK 743
Score = 36.7 bits (81), Expect = 0.012
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +3
Query: 303 SQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIGVNKAGRIQNLKNTFYQ 482
+QIA AAAL L R R L T+M +G R P + +G G+I L
Sbjct: 789 TQIATAAALCAHMLRRPVRMYLNRNTDMIMVGGRHPMKARYSVGFKPDGKITALHLDLLI 848
Query: 483 DGGCS 497
+ G S
Sbjct: 849 NAGIS 853
>07_03_0767 -
21360999-21361157,21361185-21361274,21361413-21361563,
21361650-21361887,21361984-21362191,21362442-21362462,
21363884-21364011,21364108-21364245,21364820-21365654
Length = 655
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 285 SKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEF 425
+ ITRA+ + A V L T R+ + T M A G+R+ ++ F
Sbjct: 147 TNITRAADVRAYDAAVVSLLNATVRYAVENSTRMFATGQRVGSDPGF 193
>05_02_0090 +
6507378-6507481,6507495-6507627,6507658-6507715,
6508756-6508814,6509127-6509169,6509325-6509422,
6509619-6509744
Length = 206
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 431 WRKQSW*NSKSQKYILSRRWMFL**SPHPSNS*TFPELLR 550
W Q W SK +K+ + W+F S H + PE+LR
Sbjct: 81 WSTQRWTKSKKRKWKRADEWLFPHNSCHFAELVIMPEMLR 120
>07_03_0993 - 23182070-23182615
Length = 181
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 258 VRRLGGGYGSKITRASQIACAAALVTR 338
VR L GGY K A+ A AAA+ +R
Sbjct: 32 VRVLAGGYSEKSLNANYFAAAAAVASR 58
>07_01_0921 +
7753744-7753821,7753921-7754856,7755285-7755377,
7755462-7755815
Length = 486
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 174 YSSTQWLDLTNIAIAKCLDMPVNSINIIVRRLGGGYGS 287
+S W+ ++K D P N INI + R+G Y S
Sbjct: 7 FSDLLWMPHCQHKVSKIWDSPTNCINIRLHRVGIPYHS 44
>04_03_0024 -
9623178-9624001,9624502-9624678,9625144-9625305,
9625520-9626032,9626801-9629153
Length = 1342
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 54 DSGSDISTVIEGSMKIHAQYHYTME 128
D+ +++ST I G KIH Q Y ME
Sbjct: 841 DNKAEVSTDISGIKKIHNQLAYNME 865
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,379,695
Number of Sequences: 37544
Number of extensions: 310828
Number of successful extensions: 665
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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