Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0192
         (555 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p...    97   7e-21
Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr...    85   2e-17
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ...    60   1e-09
Z74043-5|CAA98544.1|  588|Caenorhabditis elegans Hypothetical pr...    29   3.0  

>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
            protein B0222.9 protein.
          Length = 1217

 Score = 97.1 bits (231), Expect = 7e-21
 Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
 Frame = +3

Query: 54   DSGSDISTVIEGSMKIHAQYHYTMETQTSVATPTE-DGLEIYSSTQWLDLTNIAIAKCLD 230
            +S  + S V+EG   I  Q HY +ETQ+S+  P E D L +  STQ    T + +A+ + 
Sbjct: 632  ESLENSSKVLEGECDIGGQEHYYLETQSSLVIPGEGDELIVNCSTQGTSFTQLMVAETMK 691

Query: 231  MPVNSINIIVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRIP 410
            +P + I +  +RLGGG+G K+  AS IAC  A+V + L R     L    ++   GKR  
Sbjct: 692  IPAHKIIVKTKRLGGGFGGKVNNASWIACMCAIVAKKLNRPTYGFLSRADDLAITGKRHE 751

Query: 411  TNCEFEIGVNKAGRIQNLKNTFYQDGGCS 497
             + ++ +G+N  G+I+ +    + +GG S
Sbjct: 752  VHAKYRVGINFDGKIEGIHYQAWLNGGWS 780


>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical protein
            F55B11.1 protein.
          Length = 1358

 Score = 85.4 bits (202), Expect = 2e-17
 Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
 Frame = +3

Query: 63   SDISTVIEGSMKIHAQYHYTMETQTSVATPTEDG-LEIYSSTQWLDLTNIAIAKCLDMPV 239
            S    ++EGS+ +  Q H+ +ETQ  +  P ED  LEI  S Q ++   I +AKCL M  
Sbjct: 752  SKYDRIVEGSIDMGGQEHFYLETQQCIVIPHEDDELEIIISNQCVNDVQIEVAKCLGMAQ 811

Query: 240  NSINIIVRRLGGGYGSKITRASQIACAAALVTRFLGRTCRFILPLQTNMKAIGKRIPTNC 419
            + I+  V+R+GGG+G K +  + +A  A+L  +  GR  +F      +M   G R P   
Sbjct: 812  HKISTKVKRIGGGFGGKESTGAILAVPASLAAKKFGRPMKFKFERFDDMAITGTRHPFTL 871

Query: 420  EFEIGVNKAGRIQNLKNTFYQDGG 491
            ++++ V++ G+  +L  T   + G
Sbjct: 872  QYKLAVDENGKFLDLDYTALSNSG 895


>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
           protein F15E6.6 protein.
          Length = 1228

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 29/91 (31%), Positives = 52/91 (57%)
 Frame = +3

Query: 78  VIEGSMKIHAQYHYTMETQTSVATPTEDGLEIYSSTQWLDLTNIAIAKCLDMPVNSINII 257
           V+EG   + +Q H+ +ETQ+S+         ++ STQ    T + +A+ + +P + I + 
Sbjct: 678 VLEGESSLGSQEHFYLETQSSLNYRI-----VHCSTQGTSFTQLMVAETMKIPAHKIIVK 732

Query: 258 VRRLGGGYGSKITRASQIACAAALVTRFLGR 350
            +R+GG +G K+  AS IAC  ++V + L R
Sbjct: 733 TKRMGGAFGGKLNNASWIACICSVVAKKLNR 763


>Z74043-5|CAA98544.1|  588|Caenorhabditis elegans Hypothetical
           protein T19B10.9 protein.
          Length = 588

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 459 NLKNTFYQDGGCSFNEVLTPLTVKHFQN 542
           N+   F +D GC F  + +PL+V +F N
Sbjct: 171 NMLCDFEKDSGCRFKSISSPLSVGNFPN 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,036,627
Number of Sequences: 27780
Number of extensions: 266620
Number of successful extensions: 577
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)