Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0192
         (555 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   4.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   4.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   4.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   8.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   8.4  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +3

Query: 393 IGKRIPTNCEFEIGVNKAGRIQNLKNTFYQDGGCSFNEVLTP 518
           +G ++P  C F   VN A R++            S  E+L+P
Sbjct: 531 VGLKMPRYCLFGDSVNTASRMEATSQAMQIHISQSTKELLSP 572


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +3

Query: 312 ACAAALVTRFLGRTCRFILPLQTNMK---AIGKRIPTNCEFEIGVNKAGRIQNL 464
           AC+  L  +  G+  R  + + T M     +GK++P  C F   V  A + ++L
Sbjct: 569 ACSHHLTHK--GKPIRMRIGIHTGMVLAGVVGKKMPRYCLFGHNVTLANKFESL 620


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +3

Query: 315 CAAALVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIGVNKAGRI 455
           C   +    LG+  R    + ++MK++G+ +    +FE    KA R+
Sbjct: 180 CVVKIPRWDLGKFHRVCTQIGSSMKSVGEVMAIGRKFEEAFQKALRM 226


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/41 (21%), Positives = 23/41 (56%)
 Frame = -2

Query: 515 GEDFIKGTSTVLIKCIFEILNSTSFVYANLKLTIGRYTFAY 393
           G  F+ GT+T+ +     +  +++ + A+++  +G + F Y
Sbjct: 166 GGGFMSGTATLDVYNADIMAATSNVIIASMQYRVGAFGFLY 206


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/41 (21%), Positives = 23/41 (56%)
 Frame = -2

Query: 515 GEDFIKGTSTVLIKCIFEILNSTSFVYANLKLTIGRYTFAY 393
           G  F+ GT+T+ +     +  +++ + A+++  +G + F Y
Sbjct: 166 GGGFMSGTATLDVYNADIMAATSNVIIASMQYRVGAFGFLY 206


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = +1

Query: 328 WSPVSLGVLVDLSYRYKLI*KL*ANVYLPIVSLRLA*TKLVEFKISKIH 474
           W+  S         ++K + K+     LPI   R   + +  +K++KIH
Sbjct: 32  WTATSHEASAPAEGKFKTVSKVPGPFSLPIFGTRWIFSCIGYYKLNKIH 80


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 309 IACAAALVTRFLGRTCRFIL 368
           + C A  + R L R C ++L
Sbjct: 61  LVCVAVFLVRKLRRPCNYLL 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,784
Number of Sequences: 438
Number of extensions: 3331
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)