Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0191
         (376 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    54   1e-06
UniRef50_A0BDK4 Cluster: Chromosome undetermined scaffold_100, w...    33   1.7  
UniRef50_UPI00006CBA09 Cluster: hypothetical protein TTHERM_0055...    33   2.3  
UniRef50_Q1WUP7 Cluster: Protein ecsB; n=1; Lactobacillus saliva...    33   2.3  
UniRef50_Q2NE19 Cluster: Conserved hypothetical membrane-spannin...    31   5.2  
UniRef50_Q5DHJ0 Cluster: SJCHGC09514 protein; n=1; Schistosoma j...    31   6.9  
UniRef50_Q2SSR2 Cluster: PAP2 superfamily domain membrane protei...    31   9.1  
UniRef50_A0CCV5 Cluster: Chromosome undetermined scaffold_169, w...    31   9.1  
UniRef50_Q5JIX3 Cluster: Hypothetical membrane protein; n=1; The...    31   9.1  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 53.6 bits (123), Expect = 1e-06
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = -2

Query: 156 LNFFLLLRWVDELTAHLVLSGYWSP 82
           L+ FLLLRWVDELTAHLVLSGYWSP
Sbjct: 151 LSRFLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A0BDK4 Cluster: Chromosome undetermined scaffold_100, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_100, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 2153

 Score = 33.1 bits (72), Expect = 1.7
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = -3

Query: 359  RISTTISLIIIMVLLSYFYNHHCFIVGNRFRHYSQIILKIN-IINLFSI 216
            + S  I+L I+M+L     NH+  I+ N F+H+  +IL I+ ++ LFS+
Sbjct: 1554 KYSLLINLFILMLLYESASNHYLNIL-NGFQHFFSLILTIDCVVKLFSL 1601


>UniRef50_UPI00006CBA09 Cluster: hypothetical protein
           TTHERM_00558130; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00558130 - Tetrahymena
           thermophila SB210
          Length = 915

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -2

Query: 228 SIFNLTTDFNNKQEYLHIDYT-LNILNFFLLLRWVDELTAH 109
           S+FN   D   K+++L   YT + +L+FF L +WV++L AH
Sbjct: 438 SLFNCY-DTEYKEKFLSYYYTKIRVLDFFPLDQWVEKLAAH 477


>UniRef50_Q1WUP7 Cluster: Protein ecsB; n=1; Lactobacillus
           salivarius subsp. salivarius UCC118|Rep: Protein ecsB -
           Lactobacillus salivarius subsp. salivarius (strain
           UCC118)
          Length = 397

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -3

Query: 368 RSWRISTTISLIIIMVLLSY-FYNHHCFIVGNRFRHYSQIILKINIINLFSI 216
           R+W  ++ I +++ +VLL + +Y  H  ++ +     SQ+ LKI  +NLF I
Sbjct: 105 RAWVSNSVIQIVVWIVLLPFIYYGVHLNLLESIILLLSQVALKIAQVNLFFI 156


>UniRef50_Q2NE19 Cluster: Conserved hypothetical membrane-spanning
           protein; n=1; Methanosphaera stadtmanae DSM 3091|Rep:
           Conserved hypothetical membrane-spanning protein -
           Methanosphaera stadtmanae (strain DSM 3091)
          Length = 541

 Score = 31.5 bits (68), Expect = 5.2
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -2

Query: 252 NIKDKHY*SIFNLTT-DFNNKQEYLHIDYTLNILNFFL 142
           ++ DK Y    + TT   NNK+ +L +DY ++ILNFF+
Sbjct: 315 DLVDKKYIEFIDDTTFKINNKESHL-LDYEIDILNFFI 351


>UniRef50_Q5DHJ0 Cluster: SJCHGC09514 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09514 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 383

 Score = 31.1 bits (67), Expect = 6.9
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -2

Query: 186 YLHIDYTLNILNFFLLLR-WVDELTAHLV 103
           Y H DY + I  FF+LL   V+ELT HL+
Sbjct: 156 YFHQDYVIRIFLFFMLLHPDVNELTVHLL 184


>UniRef50_Q2SSR2 Cluster: PAP2 superfamily domain membrane protein;
           n=2; Mycoplasma|Rep: PAP2 superfamily domain membrane
           protein - Mycoplasma capricolum subsp. capricolum
           (strain California kid / ATCC27343 / NCTC 10154)
          Length = 273

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -3

Query: 356 ISTTISLIIIMVLLSYFYNHHCFIVGNRFRHYSQIILKINIINL 225
           IS+ + LIII +L+ YF+ +   I+ +    Y  II+   II L
Sbjct: 112 ISSLLCLIIISILIYYFHINKEIIIDSNLSIYKAIIVLTTIIGL 155


>UniRef50_A0CCV5 Cluster: Chromosome undetermined scaffold_169, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_169, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 2328

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2

Query: 228  SIFNLTTDFNNKQEYLHIDYTLNILNFFLLLRWVDELTAHLVLS 97
            +I ++ T  NN   +L++DY LN+  FF  L W D +    VLS
Sbjct: 1939 TILDILTWINNFY-FLNVDYPLNVKMFFNQLEWGDIINIPDVLS 1981


>UniRef50_Q5JIX3 Cluster: Hypothetical membrane protein; n=1;
           Thermococcus kodakarensis KOD1|Rep: Hypothetical
           membrane protein - Pyrococcus kodakaraensis
           (Thermococcus kodakaraensis)
          Length = 500

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -2

Query: 192 QEYLHIDYTLNILNFFLLLRWVDELTAHLVLSGYW 88
           ++YL  D TL  LN   L RWV +L A LVL+  W
Sbjct: 155 RDYLLKDGTLIPLNVTGLERWVPQLNAWLVLADSW 189


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,770,725
Number of Sequences: 1657284
Number of extensions: 7136299
Number of successful extensions: 13354
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13349
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)