Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0191
         (376 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0024 + 180749-180872,181826-181880,181936-182025,182075-18...    27   3.6  

>08_01_0024 +
           180749-180872,181826-181880,181936-182025,182075-182426,
           182913-183000,183162-183294,183394-184089,184305-184368,
           184489-184578
          Length = 563

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 1   GGGGHEDYT*DLTCISRWVAHLRCRCL 81
           G  G + +T D  C  R   HL+C CL
Sbjct: 501 GKVGKDMFTMDYRCEQRMATHLKCSCL 527


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,715,745
Number of Sequences: 37544
Number of extensions: 192539
Number of successful extensions: 265
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)