BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0191
(376 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071292-1|AAL48914.1| 513|Drosophila melanogaster RE32485p pro... 28 4.5
AE014296-3379|AAN12133.1| 513|Drosophila melanogaster CG5130-PB... 28 4.5
AE014296-3378|AAF51612.1| 513|Drosophila melanogaster CG5130-PA... 28 4.5
AE013599-2105|AAM70962.2| 266|Drosophila melanogaster CG30083-P... 27 5.9
AY095533-1|AAM12264.1| 489|Drosophila melanogaster SD03002p pro... 27 7.9
AY069500-1|AAL39645.1| 862|Drosophila melanogaster LD22456p pro... 27 7.9
AE014298-578|AAF45907.1| 862|Drosophila melanogaster CG2938-PB ... 27 7.9
>AY071292-1|AAL48914.1| 513|Drosophila melanogaster RE32485p
protein.
Length = 513
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 18 GLHLRPYLYLKVGGAFTL*MSMGSSNHLTPGG 113
GL L YL +GG +TL GS HLTPGG
Sbjct: 165 GLILNGLTYLLIGG-YTL--HQGSFLHLTPGG 193
>AE014296-3379|AAN12133.1| 513|Drosophila melanogaster CG5130-PB,
isoform B protein.
Length = 513
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 18 GLHLRPYLYLKVGGAFTL*MSMGSSNHLTPGG 113
GL L YL +GG +TL GS HLTPGG
Sbjct: 165 GLILNGLTYLLIGG-YTL--HQGSFLHLTPGG 193
>AE014296-3378|AAF51612.1| 513|Drosophila melanogaster CG5130-PA,
isoform A protein.
Length = 513
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 18 GLHLRPYLYLKVGGAFTL*MSMGSSNHLTPGG 113
GL L YL +GG +TL GS HLTPGG
Sbjct: 165 GLILNGLTYLLIGG-YTL--HQGSFLHLTPGG 193
>AE013599-2105|AAM70962.2| 266|Drosophila melanogaster CG30083-PA
protein.
Length = 266
Score = 27.5 bits (58), Expect = 5.9
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 103 VKWLLEPIDIYNVNAPPTLRYK 38
+ W+L +D Y V +PP ++Y+
Sbjct: 239 IDWILMVVDNYTVRSPPKIQYR 260
>AY095533-1|AAM12264.1| 489|Drosophila melanogaster SD03002p
protein.
Length = 489
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 40 CISRWVAHLRCRCLWAPV 93
C+ RWV HLR + L+ P+
Sbjct: 387 CLRRWVLHLRGQTLYVPL 404
>AY069500-1|AAL39645.1| 862|Drosophila melanogaster LD22456p
protein.
Length = 862
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 40 CISRWVAHLRCRCLWAPV 93
C+ RWV HLR + L+ P+
Sbjct: 387 CLRRWVLHLRGQTLYVPL 404
>AE014298-578|AAF45907.1| 862|Drosophila melanogaster CG2938-PB
protein.
Length = 862
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 40 CISRWVAHLRCRCLWAPV 93
C+ RWV HLR + L+ P+
Sbjct: 387 CLRRWVLHLRGQTLYVPL 404
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,772,149
Number of Sequences: 53049
Number of extensions: 327421
Number of successful extensions: 658
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 982468965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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