Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0190
(541 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0336 - 7397745-7398308,7398813-7400723 83 1e-16
05_03_0260 - 11200887-11200907,11200979-11201961,11212201-11212390 74 8e-14
07_01_1177 + 11125945-11126242,11126465-11128303,11128342-11128358 72 3e-13
01_05_0320 - 20874691-20875230,20879337-20879590,20880014-208810... 67 7e-12
12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749 64 5e-11
05_03_0207 + 10103831-10104451 61 6e-10
02_05_0338 - 28084169-28084366,28084414-28085225,28085565-280855... 58 4e-09
04_02_0031 + 8874025-8874180,8882152-8882550,8882651-8882987,888... 34 0.083
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 31 0.59
04_03_0027 + 9667508-9668800 30 1.4
06_03_1208 - 28422941-28423139,28423854-28424434,28424705-284250... 29 1.8
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 2.4
12_02_0726 - 22552005-22552035,22552507-22552598,22552970-225530... 28 4.1
08_01_0150 - 1179147-1179899,1180025-1180579 28 4.1
06_03_0557 + 22133604-22134506 28 4.1
08_02_0290 + 15383473-15383669,15385057-15385267,15386389-153864... 28 5.5
10_07_0030 - 12044953-12045524,12045567-12045876 27 7.2
08_01_0041 - 290333-290698,290854-291861 27 7.2
02_01_0344 + 2467191-2468282 27 7.2
01_01_1051 + 8290395-8290760,8291611-8291820,8292874-8292978,829... 27 7.2
11_01_0798 + 7026509-7029272,7031573-7031994 27 9.6
09_02_0082 - 4060018-4061604 27 9.6
08_02_0360 + 16196712-16197560,16198126-16198875 27 9.6
08_02_0118 + 12772636-12772910,12773151-12773254,12774097-127744... 27 9.6
08_01_0805 - 7776999-7777241,7777365-7777499 27 9.6
06_02_0306 + 14115751-14116450,14116882-14117691,14118957-14119141 27 9.6
06_02_0172 + 12594542-12596083 27 9.6
03_06_0304 - 33001393-33001527,33001627-33001764,33001861-330019... 27 9.6
>09_02_0336 - 7397745-7398308,7398813-7400723
Length = 824
Score = 83.4 bits (197), Expect = 1e-16
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 8/170 (4%)
Frame = -3
Query: 524 HGIAQRLVTPYTPEQNGVS------VTEIARSMMYAHEPLPQVLWAELINTAAYILNRTG 363
+GI + TP P+QNGV+ + ++ RSMM ++ LP LW E + TA +ILNR
Sbjct: 317 NGIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMM-SYSTLPLGLWMEALKTAIHILNRVP 375
Query: 362 PTSSDKSPHELWYGKKPIIKHLRIIGSIAYVHIPKQKRRKFDKKAIKGRLIGYDEDC--Y 189
S K+P+ELW G+ P + HLR+ GS + K D K + I Y E Y
Sbjct: 376 SKSVPKTPYELWTGRVPSLTHLRVWGSPTEAKVFNSNIGKLDPKTVSCHFISYPERSKGY 435
Query: 188 RIWITDGKHSTLVRSRDVIFDEKPLPICNSEIPKTEVETREYPITITPNT 39
R + + ++ V +R +F E + +S + + ++E R + P+T
Sbjct: 436 RFYYPN-SYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVP-APST 483
>05_03_0260 - 11200887-11200907,11200979-11201961,11212201-11212390
Length = 397
Score = 73.7 bits (173), Expect = 8e-14
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Frame = -3
Query: 533 LDTHGIAQRLVTPYTPEQNGV------SVTEIARSMMYAHEPLPQVLWAELINTAAYILN 372
LD GI PY P QNG+ ++ E AR+M+ ++ V W E ++TA + +N
Sbjct: 103 LDEEGIKHEFSAPYDPPQNGIVERKNRTLIEAARAMLDEYKT-SDVFWVEAVSTACHAIN 161
Query: 371 RTGPTSS-DKSPHELWYGKKPIIKHLRIIGSIAYVHIPKQKRRKFDKKAIKGRLIGYDED 195
R K+ +EL GKKP + + + GS ++ + + KF K +G L+GY+ +
Sbjct: 162 RLYLHKILKKTSYELLSGKKPNVSYFHVFGSKCFILSKRPRSSKFSPKVDEGFLLGYESN 221
Query: 194 CYRIWITDGKHSTLVRSRDVIFDE 123
+ + + + +RDV FDE
Sbjct: 222 AHAYRVFNKTSGIVEVTRDVTFDE 245
>07_01_1177 + 11125945-11126242,11126465-11128303,11128342-11128358
Length = 717
Score = 72.1 bits (169), Expect = 3e-13
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Frame = -3
Query: 521 GIAQRLVTPYTPEQNGVSV----TEIARS-MMYAHEPLPQVLWAELINTAAYILNRTGPT 357
GI + PYTP+QNGV+ T I+++ M ++ + + WAE NTA Y++NR+
Sbjct: 498 GIVRHHTIPYTPQQNGVAERMNRTIISKAHCMLSNARMNKRFWAEAANTACYLINRSPSI 557
Query: 356 S-SDKSPHELWYGKKPIIKHLRIIGSIAYVHIPKQKRRKFDKKAIKGRLIGYDEDC--YR 186
+ K+P E+W G LR+ G AY H+ K + +AIK +GY Y+
Sbjct: 558 PLNKKTPIEVWSGMPADYSQLRVFGCTAYAHV---DNGKLEPRAIKCLFLGYGSGVKGYK 614
Query: 185 IWITDGKHSTLVRSRDVIFDE 123
+W + + + SR V+F+E
Sbjct: 615 LWNPETNKTFM--SRSVVFNE 633
>01_05_0320 - 20874691-20875230,20879337-20879590,20880014-20881087,
20881259-20881511,20881548-20882369
Length = 980
Score = 67.3 bits (157), Expect = 7e-12
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 15/187 (8%)
Frame = -3
Query: 539 SVLDTHGIAQRLVTPYTPEQNGVS------VTEIARSMMYAHEPLPQVLWAELINTAAYI 378
S + GI + PY+P+ NGV+ +TE+ +M+ L + W E + TA ++
Sbjct: 467 SFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDT-AGLSKEWWGEAVLTACHV 525
Query: 377 LNRTGPTSSDKSPHELWYGKKPIIKHLRIIGSIAYVHIPKQKRRKFDKKAIKGRLIGY-- 204
LN+ + + E W KK + +LR G +A V++P K+RK K + +GY
Sbjct: 526 LNKIPMKHKEVTQFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAI 585
Query: 203 DEDCYRIWIT-----DGKHSTLVRSRDVIF--DEKPLPICNSEIPKTEVETREYPITITP 45
YR I D T++ SRD F +E P+ S K V RE+ I
Sbjct: 586 HSVGYRFLIVNSGVPDMHAGTILESRDATFFENEFPMKYTPSTSSKETVMPREHFAPIEH 645
Query: 44 NTNLERE 24
N E
Sbjct: 646 NDQTPEE 652
>12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749
Length = 587
Score = 64.5 bits (150), Expect = 5e-11
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Frame = -3
Query: 539 SVLDTHGIAQRLVTPYTPEQNGVS------VTEIARSMMYAHEPLPQVLWAELINTAAYI 378
S + GI PY P+ NGV+ + EI +M+ L + W E + TA Y+
Sbjct: 287 SFCEEFGIIHERTPPYLPQSNGVAERKNRTLAEIVNAMLDT-TGLCKEWWGEAVLTACYV 345
Query: 377 LNRTGPTSSDKSPHELWYGKKPIIKHLRIIGSIAYVHIPKQKRRKFDKKAIKGRLIGY-- 204
LN+ +P E W KK + +LR G +A V++P K+RK + +GY
Sbjct: 346 LNKIPMKHKKVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPNTVDCVFLGYAI 405
Query: 203 DEDCYRIWIT-----DGKHSTLVRSRDVIFDEKPLPI 108
YR I D T+ SRD IF E P+
Sbjct: 406 HSVGYRFLIVNSGVPDMHVGTIFESRDAIFFENEFPM 442
>05_03_0207 + 10103831-10104451
Length = 206
Score = 60.9 bits (141), Expect = 6e-10
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Frame = -3
Query: 518 IAQRLVTPYTPEQNGVS------VTEIARSMMYAHEPLPQVLWAELINTAAYILNRTGPT 357
I +L P TP+ NGVS + ++ RSMM + LP W + TAA+ LNR
Sbjct: 105 IVPQLTPPGTPQWNGVSERRNRTLLDMVRSMM-SQTDLPLSFWDYALGTAAFTLNRVPSK 163
Query: 356 SSDKSPHELWYGKKPIIKHLRIIGSIAYV 270
S DK+ +E+W GK+P + L+I G YV
Sbjct: 164 SVDKTLYEIWTGKRPSLSFLKIWGCEVYV 192
>02_05_0338 -
28084169-28084366,28084414-28085225,28085565-28085595,
28085638-28086214,28086439-28087145,28087188-28087228,
28087253-28087366,28087517-28088108
Length = 1023
Score = 58.0 bits (134), Expect = 4e-09
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Frame = -3
Query: 356 SSDKSPHELWYGKKPIIKHLRIIGSIAYVHIPKQKRRKFDKKAIKGRLIGYDED--CYRI 183
+ DK+P+E+W G+KP + +LR G +A V++P K+RK K + +GY YR
Sbjct: 490 NKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRF 549
Query: 182 WIT-----DGKHSTLVRSRDVIFDEKPLPICNSEIPKTEVETREYPITITPNTNLE 30
I D T++ SRD F E P+ ++ + + P +ITP E
Sbjct: 550 LIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQ-PSEIIPSSITPPEQTE 604
>04_02_0031 +
8874025-8874180,8882152-8882550,8882651-8882987,
8883234-8884060
Length = 572
Score = 33.9 bits (74), Expect = 0.083
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = -3
Query: 521 GIAQRLVTPYTPEQNGVS------VTEIARSMMYAHEPLPQVLWAELINTAAYILNR 369
GIA + P TP+ NGVS + ++ RSMM + L W+ + TA + LNR
Sbjct: 513 GIAPQFTPPGTPQWNGVSERRNRTLLDMVRSMM-SQTDLSLSFWSYALETAVFTLNR 568
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 31.1 bits (67), Expect = 0.59
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 GGGGWNVTSLSKFVFG-VMVIGYSLVSTSVLGISLLQIGRGFSSKITSRERTSVECFPSV 177
GG G+ VT KF G V +IG+ V S +LL + G S+ S E T++ C P +
Sbjct: 51 GGDGFEVT---KFGHGRVALIGFPSVGKS----TLLTMLTGTHSEAASYEFTTLTCIPGI 103
Query: 178 IQ 183
IQ
Sbjct: 104 IQ 105
>04_03_0027 + 9667508-9668800
Length = 430
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -3
Query: 521 GIAQRLVTPYTPEQNGVSVTEIARSMMYAHEPLPQV--LWAELINTAAYILNRTGPTSSD 348
G +VTPY P+ G + T + M + + ++ W + A + T
Sbjct: 343 GAQHNIVTPYHPKTGGQAETRNKQIMNILQKTVNEMGKAWKNKLPNALWAYRTTYNMPIG 402
Query: 347 KSPHELWYGK 318
SP++L YGK
Sbjct: 403 MSPYQLVYGK 412
>06_03_1208 -
28422941-28423139,28423854-28424434,28424705-28425078,
28425235-28425339,28425902-28425970,28426084-28426156,
28426395-28426478,28426616-28426648,28426731-28426790,
28427535-28427627,28427851-28427970,28428804-28428886,
28428887-28429007,28429114-28429164,28429245-28429333,
28429429-28429561,28430220-28430354,28430581-28430952,
28431679-28431796,28431883-28431998,28432131-28432442
Length = 1106
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 260 KQKRRKFDKKAIKGRLIGYDEDCYRIWITDGKHSTLVRSRDVIFDEKPLPICNSEIPK-- 87
K + D +I D DC+ + S ++R++ + D KP+ +C+S+ PK
Sbjct: 331 KSSKGNRDHSGKNNTIIHIDMDCFFV-------SVVIRNKPELHD-KPVAVCHSDNPKGT 382
Query: 86 TEVETREYP 60
E+ + YP
Sbjct: 383 AEISSANYP 391
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 410 WAELINTAAYILNRTGPTSSDKS--PHELWYGKKPIIKHLRIIGSIAYVHI 264
WA NT+ I N S S PHE +IKHLR + S+A + I
Sbjct: 1392 WASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTVIKHLRPVNSVAMLRI 1442
>12_02_0726 - 22552005-22552035,22552507-22552598,22552970-22553094,
22553221-22553311,22553475-22553755,22554211-22554394,
22554499-22554583,22554692-22554782,22554909-22555293,
22555457-22555669,22555873-22556418,22556572-22556788,
22556907-22557058,22557519-22557663,22557846-22557907,
22559130-22559291,22559393-22559482,22560055-22560215,
22560907-22560997,22561125-22561308,22561556-22561737,
22561857-22562086,22562622-22562685
Length = 1287
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 286 PIIRRCLIIGFFPYQSSCGDLSELV 360
P++ C+ +GF P+ S C + +LV
Sbjct: 1132 PVLDPCVAVGFLPFSSDCLRVGQLV 1156
>08_01_0150 - 1179147-1179899,1180025-1180579
Length = 435
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 118 GFSSKITSRERTSVECFPSVIQIR*QSSSYPISR 219
GFSS R TS+E P R + +YP+ R
Sbjct: 346 GFSSSFPQRRHTSLEAPPPTASTRLRPPTYPLRR 379
>06_03_0557 + 22133604-22134506
Length = 300
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -3
Query: 500 TPYTPEQNGVS--VTEIARSMMYAHEPLPQVLWAELINTAAYILNRTGPTSSDKSPHELW 327
T Y P+ NG + V +I M+ A + W + A + N + S SP+E
Sbjct: 42 TAYHPQTNGQTERVNQILEDMLRACALDFEGTWDRCLPYAEFSYNNSYQASIQMSPNEAM 101
Query: 326 YGKK 315
+G+K
Sbjct: 102 FGRK 105
>08_02_0290 +
15383473-15383669,15385057-15385267,15386389-15386440,
15386545-15386863,15387022-15387121,15387391-15387657,
15387780-15387857,15387943-15388032,15388119-15388168,
15388267-15388366,15388777-15388875,15389023-15389136,
15389238-15389412,15389726-15390132,15390565-15390639,
15391412-15391438
Length = 786
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 102 ITDRKRFLIEDYVTRADERRVFSVCDPDTVAIFVVPDKSTFYRLFVEF 245
+ +R F IED +ER VFS + + ++PDK Y + + F
Sbjct: 215 VENRPSFTIEDVRDEEEERAVFSF-QQELFSRNLLPDKHNDYHMLLRF 261
>10_07_0030 - 12044953-12045524,12045567-12045876
Length = 293
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 521 GIAQRLVTPYTPEQNGVSVT--EIARSMMYAHEPLPQVLWAELINTAAYILNRTGPTSSD 348
G + PY P+ +G + T + ++++ + W + ++ A + TS +
Sbjct: 106 GAKHNMAVPYHPQTSGRAETSNKQIKNILQKTVNKMETGWKDKLSDALWAYQIAYKTSIE 165
Query: 347 KSPHELWYGK 318
SP+++ YGK
Sbjct: 166 MSPYQIAYGK 175
>08_01_0041 - 290333-290698,290854-291861
Length = 457
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 323 GKKPIIKHLRIIGSIAYV 270
G+ P+I HL +IGS+ YV
Sbjct: 41 GRLPVIGHLHLIGSLPYV 58
>02_01_0344 + 2467191-2468282
Length = 363
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = -3
Query: 539 SVLDTHGIAQRLVTPYTPEQNG---VSVTEIARSMMYAHEPLPQVLWAELINTA--AYIL 375
S +++G +PY + NG +S + + + E P+ W E+++ A AY +
Sbjct: 148 SFAESYGNKLLSSSPYYTQANGQAELSNKTLLKIVKKKIEEHPK-RWHEVLSEALWAYRI 206
Query: 374 NRTGPTSSDKSPHELWYGKKPIIKHLRIIGSIAYV 270
++ G T +P EL YG++ ++ +GS+ Y+
Sbjct: 207 SKHGATKV--TPFELVYGQEAVLPVEVNLGSLRYI 239
>01_01_1051 +
8290395-8290760,8291611-8291820,8292874-8292978,
8293040-8293048,8294426-8294539,8294632-8294796
Length = 322
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -3
Query: 296 RIIGSIAYVHIPKQKRRKFDKKAIKGRLIGYDEDCYRIWI 177
R IGS P +KR+ F + + GR+ G +W+
Sbjct: 214 RSIGSTGQRDAPGRKRQVFKNRKMPGRMGGVQRTVKNVWV 253
>11_01_0798 + 7026509-7029272,7031573-7031994
Length = 1061
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 1 GGGGWNVTSLSKFVFGVMVIGYSLVSTSVLG 93
GGG W T+ K FG+ + S+ +V+G
Sbjct: 704 GGGAWRFTAFHKVDFGIAEVIESMKDGNVVG 734
>09_02_0082 - 4060018-4061604
Length = 528
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 451 LAISVTLTPFCSGVYGVTSRCAIPCVS 531
L +S T T + G GV+S A+PC S
Sbjct: 464 LTLSPTTTRYSFGYSGVSSPSAVPCTS 490
>08_02_0360 + 16196712-16197560,16198126-16198875
Length = 532
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = -3
Query: 521 GIAQRLVTPYTPEQNGVSVT--EIARSMMYAHEPLPQVLWAELINTAAYILNRTGPTSSD 348
G + TPY P+ +G + T + +++M W + ++ A + T
Sbjct: 95 GAKHNVATPYHPQTSGQAETLNKQIKNIMQKTVKKMGTGWKDRLSDALWAYRTVYKTPIG 154
Query: 347 KSPHELWYGK 318
SP+++ YGK
Sbjct: 155 MSPYQIVYGK 164
>08_02_0118 +
12772636-12772910,12773151-12773254,12774097-12774487,
12774795-12774870,12775030-12775047
Length = 287
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = -3
Query: 521 GIAQRLVTPYTPEQNGVSVTEIARSMMYAHEPLPQVL--WAELINTAAYILNRTGPTSSD 348
G + TPY P+ +G + T + + + ++ W + + A + T
Sbjct: 23 GAKHNVATPYHPQTSGQAETSNKQIKNILQKTVNKMGTGWKDRLPDALWAYRTAYKTPIG 82
Query: 347 KSPHELWYGKKPIIKH 300
SP+++ YGK + H
Sbjct: 83 MSPYQIVYGKVKLFGH 98
>08_01_0805 - 7776999-7777241,7777365-7777499
Length = 125
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = -3
Query: 254 KRRKFDKKAIKGRLIGYDEDCYRIWITDGKHSTLV 150
+R + + I GR+ +++CYR+ +++G STLV
Sbjct: 40 RRLEHEISRIDGRIRELEDECYRL-VSEGHGSTLV 73
>06_02_0306 + 14115751-14116450,14116882-14117691,14118957-14119141
Length = 564
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = -3
Query: 521 GIAQRLVTPYTPEQNGVSVTEIARSMMYAHEPLPQVL--WAELINTAAYILNRTGPTSSD 348
G + PY P+ + + T + M + + ++ W E ++ A + T T
Sbjct: 50 GAKHNVAIPYHPQTSSQAETSNKQIMNILQKTVNKMGTGWKEKLSDALWAYRTTYKTPIG 109
Query: 347 KSPHELWYGK 318
SP+++ YGK
Sbjct: 110 MSPYQIVYGK 119
>06_02_0172 + 12594542-12596083
Length = 513
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 377 LNRTGPTSSDKSPHELWYGKKPIIKHLRIIGSIAYVHI 264
+ R+G DK P G+ P+I HL +IGS+ ++ +
Sbjct: 26 VTRSGAKLLDKLPSVP--GRLPVIGHLHLIGSLPHISL 61
>03_06_0304 -
33001393-33001527,33001627-33001764,33001861-33001938,
33002048-33002124,33003370-33003871
Length = 309
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 286 PIIRRCLIIGFFPYQSSCGDLSELV 360
PI+RR LI+ PY +C SE++
Sbjct: 163 PIVRRGLIVPDLPYLEACSFRSEVI 187
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,443,871
Number of Sequences: 37544
Number of extensions: 327843
Number of successful extensions: 825
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -