Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0190
(541 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL032636-1|CAA21605.1| 343|Caenorhabditis elegans Hypothetical ... 28 3.7
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 28 4.9
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 28 4.9
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 27 6.5
AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical ... 27 6.5
AC006679-5|AAK84468.2| 388|Caenorhabditis elegans Hypothetical ... 27 6.5
U41993-6|AAA83448.2| 313|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 30.7 bits (66), Expect = 0.70
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 101 SEIPKTEVETREYPITITPNTNLEREVTFQPPP 3
+E+P T E P+T+TP T L VT + P
Sbjct: 733 TEVPMTGPSRTEVPMTVTPETGLSSTVTSKTEP 765
>Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical
protein C08H9.10 protein.
Length = 457
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = -1
Query: 211 SGTTKIATVSGSQTENTRRSSALVT*SSMRNLFLSVIVKFLKQ 83
+ T K+ G Q+ N+R S LV+ + RN+F++ IV F+++
Sbjct: 169 NSTLKVMISIGGQS-NSRSFSRLVSNETSRNVFVNSIVSFVQK 210
>AL032636-1|CAA21605.1| 343|Caenorhabditis elegans Hypothetical
protein Y40B1B.3 protein.
Length = 343
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 280 IEPIIRRCLIIGFFPYQSSCGDLSELVGPVLFSMYAAVLMSSAHS 414
IE + + +GF SC D SE++ PVL + Y S+H+
Sbjct: 63 IEAVFKDGNTVGFEISTESCADCSEVMYPVLGTYYEDGSYDSSHA 107
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical
protein T06E4.3b protein.
Length = 2514
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 28 LSKFVFGVMVIGYSLVSTSVLGISLLQIGRGFSSKIT 138
LS F F I ++++ S+L SLL RG +SK+T
Sbjct: 857 LSDFNFPNQKITFNMIRPSLLYWSLLSSARGINSKLT 893
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical
protein T06E4.3a protein.
Length = 2531
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 28 LSKFVFGVMVIGYSLVSTSVLGISLLQIGRGFSSKIT 138
LS F F I ++++ S+L SLL RG +SK+T
Sbjct: 857 LSDFNFPNQKITFNMIRPSLLYWSLLSSARGINSKLT 893
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 28 LSKFVFGVMVIGYSLVSTSVLGISLLQIGRGFSSKIT 138
LS F F I ++++ S+L SLL RG +SK+T
Sbjct: 857 LSDFNFPNQKITFNMIRPSLLYWSLLSSARGINSKLT 893
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = -3
Query: 533 LDTHGIAQRLVTPYTPEQNGVSVTEIARSMMYAHEPLPQVLWAELINTAAYILNRTGPTS 354
++T GI L+ P + +S + + EPLPQ L + ++ GPT
Sbjct: 2340 IETEGITHCLLFPSLVQSFNISKIKNLAYWVVGGEPLPQSLLDSALALGIKVIQNYGPTE 2399
Query: 353 S 351
+
Sbjct: 2400 T 2400
>AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical
protein Y71H2B.7 protein.
Length = 406
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 309 NRFLSIPKFMRRFI*TCGTCSVQYV 383
+ + IP+FMR+F+ T G C + YV
Sbjct: 234 SELVKIPQFMRQFLTTDGHCFLLYV 258
>AC006679-5|AAK84468.2| 388|Caenorhabditis elegans Hypothetical
protein R13A5.7 protein.
Length = 388
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 146 SRDVIFDEKPLPICNSEIPKTEVETREYPITITPNTNLEREVTF 15
S V EKP+ I +P T +T + PN NL + F
Sbjct: 14 SNSVFVAEKPIVIPLELVPNTSTQTPTFVYVPHPNRNLMSNIIF 57
>U41993-6|AAA83448.2| 313|Caenorhabditis elegans Hypothetical
protein F44A2.7 protein.
Length = 313
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 448 DLAISVTLTPFCSGVYGVTSRC 513
+LAI LTPFC GV+ C
Sbjct: 265 NLAIPFVLTPFCDGVFVTKEFC 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,276,404
Number of Sequences: 27780
Number of extensions: 295405
Number of successful extensions: 815
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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