Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0190
         (541 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    26   0.28 
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   3.5  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   3.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   6.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   8.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.1  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 128 DEKPLPICNSEIPKTEVETREYPITITPNTN-LEREVT 18
           DE+ LP    E     +E  ++PIT+ P  N +E++ T
Sbjct: 510 DERGLPFTFREQKNLMIELDKFPITLQPGKNTIEQKST 547


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 477 VLFRCIRGDESLCY 518
           VL R +RG E  CY
Sbjct: 376 VLMRTVRGKEKTCY 389


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 477 VLFRCIRGDESLCY 518
           VL R +RG E  CY
Sbjct: 376 VLMRTVRGKEKTCY 389


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 350 LNLWDLFCSVCM 385
           +NLW  FCS C+
Sbjct: 354 VNLWSGFCSQCI 365


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 395 NTAAYILNRTGPTSS 351
           N   Y+ N+TGP SS
Sbjct: 383 NVDQYLYNQTGPLSS 397


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 360 GTCSVQYVCGGINELCP*HLR*WLMSVHH*SCYLRYAYSVLF 485
           G C  + +  G     P H+   L+S H+ S    YA+ +LF
Sbjct: 742 GFCITEVMMLGSIVGTPVHMAPELLSGHYDSSVDVYAFGILF 783


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 360 GTCSVQYVCGGINELCP*HLR*WLMSVHH*SCYLRYAYSVLF 485
           G C  + +  G     P H+   L+S H+ S    YA+ +LF
Sbjct: 780 GFCITEVMMLGSIVGTPVHMAPELLSGHYDSSVDVYAFGILF 821


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 458 IARSMMYAHEP-LPQVLWAELINTAAYILNRTGPTSSDKSPHELWY 324
           +A   +YA +P   +VL   +I+    ++    PT  DK+P +LWY
Sbjct: 557 VANRYVYASQPDKDRVL---VISEIQMVIVDVIPT--DKNPVQLWY 597


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = -3

Query: 86  TEVETREYPITITPNTNLEREVTFQPP 6
           T   T     T TPNT      T  PP
Sbjct: 665 TTTTTTTTTTTTTPNTTQNASATTPPP 691


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,327
Number of Sequences: 438
Number of extensions: 3780
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)