Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0189
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.6  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   4.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   6.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +2

Query: 554 CTSIQCDQWRITCWK 598
           C + +C+  + TCW+
Sbjct: 873 CVTCKCENGKPTCWR 887


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 127 NQSXLVKSLTLVATLLWKLIW*QSLACSGQLYPLV 231
           N+    KSL L   ++W +        SG  YP++
Sbjct: 341 NKVEYAKSLNLGGVMIWSIETDDFRGVSGTKYPIL 375


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 343 NLQKPTSKSPNRERLMNSCLSW 408
           N +    KSP  E L+++  SW
Sbjct: 228 NFENYEPKSPEDEELLDAIFSW 249


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 80  YPYLTKLHLTSRVWQNIRIWCW 15
           Y ++   HL   V   + IWCW
Sbjct: 115 YGFVIVAHLLFLVIFVLNIWCW 136


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 249 HEHQWMHQRVQLPGTSQALLPD 184
           H+HQ     VQ+P    A+ PD
Sbjct: 25  HQHQHYGAAVQVPQGGGAVQPD 46


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 101 RLS*IKRYPYLTKLHLTSRVWQNIRIWCW 15
           RL  +  Y    K  L  ++WQ I+ W +
Sbjct: 19  RLFALVPYYNFEKFSLEHQLWQKIQAWTY 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,506
Number of Sequences: 336
Number of extensions: 2454
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)