Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0187
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical ... 73 3e-13
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 34 0.082
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 34 0.082
AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical... 31 0.58
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 30 1.3
Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41030-4|AAA82364.1| 547|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 29 2.3
Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF100657-4|AAK70655.2| 261|Caenorhabditis elegans Hypothetical ... 28 5.4
AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical ... 28 5.4
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 28 5.4
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 28 5.4
U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine rece... 28 7.1
AF067947-5|AAO25993.2| 380|Caenorhabditis elegans Hypothetical ... 28 7.1
AF022975-1|AAB70675.3| 587|Caenorhabditis elegans Hypothetical ... 28 7.1
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 27 9.4
U53180-4|AAA96286.2| 558|Caenorhabditis elegans Suppressor of p... 27 9.4
AY160228-1|AAN62581.1| 558|Caenorhabditis elegans suppressor of... 27 9.4
AF548624-1|AAN59932.1| 558|Caenorhabditis elegans suppressor of... 27 9.4
>AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical
protein Y43F8C.6 protein.
Length = 422
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/80 (41%), Positives = 54/80 (67%)
Frame = +3
Query: 144 NSAAKVGEIFREAGTAFNKLSEMTMLLHPMGDSQPGGKWTEEEIEMLRNCVHRFAVDLNK 323
N AAKV E+F AG AF KL ++T+ LH D+ KW+E+E++ L+N + RFA +L++
Sbjct: 151 NLAAKVAEVFLTAGHAFQKLGDLTLQLHTTTDADES-KWSEKEVDNLKNALTRFAHELDQ 209
Query: 324 LSQHIKNRTVNQIRSTLKKK 383
+S + NRT I++ +K++
Sbjct: 210 ISTCVANRTTKHIKNDIKRR 229
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 183 GTAFNKLSEMTMLLHPMGDSQPGGKWTEEEIEMLRNCVHRFAVDLNKLSQHIKNRTVNQ 359
G ++ + + + G + PG WTE+E +L + F D NK+ H+ RT ++
Sbjct: 233 GLKIDQYQKQAIAMRTKG-APPGRDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHE 290
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 183 GTAFNKLSEMTMLLHPMGDSQPGGKWTEEEIEMLRNCVHRFAVDLNKLSQHIKNRTVNQ 359
G ++ + + + G + PG WTE+E +L + F D NK+ H+ RT ++
Sbjct: 233 GLKIDQYQKQAIAMRTKG-APPGRDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHE 290
>AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical
protein Y105E8B.4 protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.58
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = -3
Query: 632 QFANFKQISIQRLTS-IYTKPLRMGLSIYQLLE--QISDGYLLVSGFALELKFDV-ICQF 465
+ +F S++ + IY ++ + +YQ ++ QI++ Y ++ AL++ + +
Sbjct: 270 EILDFSPTSVRAMVEFIYAGVIKSDIDVYQAVDVMQIAEKYQIL---ALKMTCEQHLLDR 326
Query: 464 FNVNFVLGCVQHVKRY 417
NVN VL C+ H +RY
Sbjct: 327 LNVNNVLECITHAERY 342
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 288 NCVHRFAVDLNKLSQHIKNRTVNQIRSTLKKKAFEDAGIPVRQVT--LNMLNASENEV-- 455
NC+ R+ ++L + +NR V Q++ + + + IP R T M N +
Sbjct: 376 NCLERWVLELAQNELGTRNRWVEQLQFLVME--YNQKPIPDRMETPFERMFNRKAPNLYH 433
Query: 456 --DVEELTNDVKLEFESEPGNEEVAIRN 533
D +E+ +D + + SE NEE + N
Sbjct: 434 NGDNQEIIHDKYISYHSELRNEEEGVEN 461
>Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -3
Query: 461 NVNFVLGCVQHVKRYLSHRYTCVFKSFLLQR*SNLIYCPILNVLTEFIQ 315
N N+V ++H+KR+LS + S Q SN YC L+ + + ++
Sbjct: 75 NKNYVTLSIEHLKRFLSSVHLLSSFSISTQSASNPNYCSYLHEIEDILE 123
>Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -3
Query: 461 NVNFVLGCVQHVKRYLSHRYTCVFKSFLLQR*SNLIYCPILNVLTEFIQ 315
N N+V ++H+KR+LS + S Q SN YC L+ + + ++
Sbjct: 75 NKNYVTLSIEHLKRFLSSVHLLSSFSISTQSASNPNYCSYLHEIEDILE 123
>U41030-4|AAA82364.1| 547|Caenorhabditis elegans Hypothetical
protein C44C1.4a protein.
Length = 547
Score = 29.9 bits (64), Expect = 1.8
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 3/127 (2%)
Frame = +3
Query: 144 NSAAKVGEIFREAGTAFNKLSEMTMLLHPMGDSQPGGKWTEE--EIEMLRNCVHRFAVDL 317
N A GEI + T ++ E + + Q K+ E+ + + + V + +
Sbjct: 267 NITANFGEIGQNIKTLISEFQEKKHINKNLESIQDMKKFVEDYPQFKKISGTVSKHVSLV 326
Query: 318 NKLSQHIKNRTVNQIRSTLKKKAFE-DAGIPVRQVTLNMLNASENEVDVEELTNDVKLEF 494
+LS ++ + + + + D G + V + N EVD+ L L F
Sbjct: 327 GELSNLVQKHNLLGVSEVEQAIVSDGDHGKCINLVRGLLKNTKTREVDIIRLVLLYALRF 386
Query: 495 ESEPGNE 515
E+ PGNE
Sbjct: 387 ENAPGNE 393
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical protein
F21G4.2 protein.
Length = 1573
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/87 (22%), Positives = 34/87 (39%)
Frame = +3
Query: 255 KWTEEEIEMLRNCVHRFAVDLNKLSQHIKNRTVNQIRSTLKKKAFEDAGIPVRQVTLNML 434
+W +E + NC+ F+ L++ V + + VRQ+T
Sbjct: 1237 RWLSVRLEFIGNCIVLFSALFAALTRTTTTSGVIGLSVSYALNITTVLNFAVRQITKLET 1296
Query: 435 NASENEVDVEELTNDVKLEFESEPGNE 515
N E E + + E++SEPG E
Sbjct: 1297 NIVSVERVKEYAETETEAEWKSEPGKE 1323
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/87 (22%), Positives = 34/87 (39%)
Frame = +3
Query: 255 KWTEEEIEMLRNCVHRFAVDLNKLSQHIKNRTVNQIRSTLKKKAFEDAGIPVRQVTLNML 434
+W +E + NC+ F+ L++ V + + VRQ+T
Sbjct: 1237 RWLSVRLEFIGNCIVLFSALFAALTRTTTTSGVIGLSVSYALNITTVLNFAVRQITKLET 1296
Query: 435 NASENEVDVEELTNDVKLEFESEPGNE 515
N E E + + E++SEPG E
Sbjct: 1297 NIVSVERVKEYAETETEAEWKSEPGKE 1323
>Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical
protein F20D1.6 protein.
Length = 915
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 3/26 (11%)
Frame = +3
Query: 423 LNMLNA---SENEVDVEELTNDVKLE 491
LNMLNA SEN++ +EL N+VKL+
Sbjct: 413 LNMLNAASMSENQLSDDELVNNVKLD 438
>AF100657-4|AAK70655.2| 261|Caenorhabditis elegans Hypothetical
protein F52C12.2 protein.
Length = 261
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 444 ENEVDVEELTNDVKLEFESEPGNEE 518
E EV+ EE D++ E SEPG+E+
Sbjct: 24 EEEVETEEEEEDIEDESTSEPGSED 48
>AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical
protein K12B6.1 protein.
Length = 881
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Frame = +3
Query: 282 LRNCVHRFAVDLNKLSQHIKNRTVNQIRSTLKKKAFEDAGIPVRQVTLNMLNASEN---- 449
L +C+ + +L + N TV+ I + FE+A RQ+ + + + N
Sbjct: 504 LVDCIQHLTSTMRQLGMEVSNPTVSLINRGYLRSIFENAKAANRQLIMFITKSMNNYHTE 563
Query: 450 ----EVDVEELTNDVKLEFESEPGNEEVAIRNL 536
E + + LT D++ E + ++ +N+
Sbjct: 564 IKCLEQEFDLLTQDIRFETAVKLAQQQNTRKNI 596
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 318 NKLSQHIKNRTVNQIRSTLKKKAFEDAGIPVRQVTLNMLNASENEVDVEELTND 479
+KL+ +N R + AG+P R+ + L EN+ D EE T+D
Sbjct: 541 SKLTNRRHTAPINNNRLRRNRPNTVGAGLPHRKDGGSSLEEKENQADCEETTDD 594
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 324 LSQHIKNRTVNQIRSTLKKKAFEDAGIPVRQVTLNMLNASENE 452
LSQH + + +L +K EDA PVR V ++ +E+E
Sbjct: 1471 LSQHQATEIIIRWDESLPRKLTEDAESPVRAVQVSYQKTNEDE 1513
>U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine
receptor, class x protein74 protein.
Length = 323
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 521 YLLVSGFALELKFDVICQFFNVNFVL 444
YL VSGFA + F+VIC VN ++
Sbjct: 28 YLYVSGFAEKTSFNVICLVRAVNNII 53
>AF067947-5|AAO25993.2| 380|Caenorhabditis elegans Hypothetical
protein T10B5.2 protein.
Length = 380
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3
Query: 437 VQHVKRYLSHRYTC 396
V+H+ RYL +RYTC
Sbjct: 18 VEHIYRYLQYRYTC 31
>AF022975-1|AAB70675.3| 587|Caenorhabditis elegans Hypothetical
protein K09C6.7 protein.
Length = 587
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3
Query: 437 VQHVKRYLSHRYTC 396
V+H+ RYL +RYTC
Sbjct: 134 VEHIYRYLQYRYTC 147
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -3
Query: 359 LIYCPILNVLT--EFIQVYCKSMYTIAQHFYFFFSPFTSRLRISHG 228
+I P + VL+ +F+Q+ S+++I +H+ +S F L + HG
Sbjct: 587 IITKPKVEVLSKMDFLQIMLNSVHSIPEHWQSQYSEFYMSLDLYHG 632
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -3
Query: 359 LIYCPILNVLT--EFIQVYCKSMYTIAQHFYFFFSPFTSRLRISHG 228
+I P + VL+ +F+Q+ S+++I +H+ +S F L + HG
Sbjct: 587 IITKPKVEVLSKMDFLQIMLNSVHSIPEHWQSQYSEFYMSLDLYHG 632
>U53180-4|AAA96286.2| 558|Caenorhabditis elegans Suppressor of
presenilin defectprotein 1 protein.
Length = 558
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +3
Query: 258 WTEEEIEMLRNCVHRFAVDLNKLSQHIKNRTVNQI 362
WT++EI + NC F + +++ + +R++ I
Sbjct: 198 WTDQEITLFENCYQIFGKNFSQIRSALCHRSLQSI 232
>AY160228-1|AAN62581.1| 558|Caenorhabditis elegans suppressor of
presenilin 1 protein.
Length = 558
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +3
Query: 258 WTEEEIEMLRNCVHRFAVDLNKLSQHIKNRTVNQI 362
WT++EI + NC F + +++ + +R++ I
Sbjct: 198 WTDQEITLFENCYQIFGKNFSQIRSALCHRSLQSI 232
>AF548624-1|AAN59932.1| 558|Caenorhabditis elegans suppressor of
presenilin defect protein.
Length = 558
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +3
Query: 258 WTEEEIEMLRNCVHRFAVDLNKLSQHIKNRTVNQI 362
WT++EI + NC F + +++ + +R++ I
Sbjct: 198 WTDQEITLFENCYQIFGKNFSQIRSALCHRSLQSI 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,706,748
Number of Sequences: 27780
Number of extensions: 262959
Number of successful extensions: 781
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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