Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0187
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.6  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   3.6  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   3.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.3  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 306 QIYVHNCAAFLFLLQSIYLPAANLPWDE 223
           ++ + NC  +   L+ + +P  NL W E
Sbjct: 162 EVCLENCTGYQQYLRLLEVPQINLEWGE 189


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 623 NFKQISIQRLTSIY 582
           NFK+  +Q LTSIY
Sbjct: 78  NFKENIVQELTSIY 91


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 623 NFKQISIQRLTSIY 582
           NFK+  +Q LTSIY
Sbjct: 78  NFKENIVQELTSIY 91


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +3

Query: 105 IKHFFAINYQKMNNSAAKVGEIFREAGTAFNKLSEMTMLLHPMG 236
           I  F A     + N+   + ++     T  NKL E T  L P G
Sbjct: 324 IVDFIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETYALAPAG 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,693
Number of Sequences: 438
Number of extensions: 3422
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)