Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0186
(729 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.) 191 6e-49
SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 4e-25
SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 6e-23
SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27) 69 4e-12
SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_10343| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=0.00044) 50 2e-06
SB_47347| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=1e-17) 48 8e-06
SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_55185| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=4.5e-16) 33 0.24
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 31 0.72
SB_42487| Best HMM Match : Extensin_2 (HMM E-Value=0.084) 31 1.3
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 31 1.3
SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 191 bits (465), Expect = 6e-49
Identities = 83/112 (74%), Positives = 101/112 (90%)
Frame = +1
Query: 394 GGMDMGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPIIIAGNKEQQKKYLGRLIDEPLV 573
GG+ +GV DGC+V EEL+Y C+GI TA+EA+ L + P+I+AGN+EQ+KKYLGR+I EP++
Sbjct: 175 GGIGLGVLDGCVVTEELSYACSGIQTAIEANSLAEMPVILAGNEEQKKKYLGRMIKEPIM 234
Query: 574 AAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGQKMWITNGGVANWYFVLART 729
AAY VTEP AGSDVAGIKTRAEKKGDE+++NGQKMWITNGGVANWYFVLART
Sbjct: 235 AAYCVTEPTAGSDVAGIKTRAEKKGDEYVINGQKMWITNGGVANWYFVLART 286
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/38 (52%), Positives = 31/38 (81%)
Frame = +1
Query: 211 TGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGE 324
+G F ++DE +ALQ++ARKF ++EI+P A ++DKTGE
Sbjct: 32 SGISFAMSDELRALQDMARKFAREEIMPKAAEHDKTGE 69
>SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 111 bits (268), Expect = 4e-25
Identities = 66/170 (38%), Positives = 94/170 (55%), Gaps = 3/170 (1%)
Frame = +1
Query: 229 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGHIPEHCGGM 402
LT EQ L+E+A F ++E+ P A Q DK +P KK ++G +P GG+
Sbjct: 41 LTSEQIHLREVAYNFCQNELAPYADQIDKENNFPKLREFWKKLGDLGFHGITVPVDDGGI 100
Query: 403 DMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 579
G + +V EE++ I + A S L I GNKEQ++KYL +L+ + A
Sbjct: 101 GSGYMEHIIVLEEMSRVSGSIALSYGAHSNLCINQIARNGNKEQKRKYLPKLLSGEHIGA 160
Query: 580 YGVTEPGAGSDVAGIKTRAEKKGDEWILNGQKMWITNGGVANWYFVLART 729
++E AGSDV +K RA+K GD ++LNG KMWITNG A+ V A+T
Sbjct: 161 LAMSEANAGSDVVSMKLRADKDGDHYVLNGHKMWITNGPDADVLIVYAKT 210
>SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 104 bits (250), Expect = 6e-23
Identities = 62/169 (36%), Positives = 92/169 (54%), Gaps = 3/169 (1%)
Frame = +1
Query: 232 TDEQKALQELARKFTKDEIIPVAGQYDKTGEYP-WPVVKKAWEVGLMNGHIPEHCGGMDM 408
TD+ L+E KF + EI P +++K +P + KK + G + P GGM +
Sbjct: 259 TDDHVQLRENLNKFIEKEINPFVDEWEKAKMFPAHELFKKFGKAGYFGVNKPVKYGGMGL 318
Query: 409 GVFDGCLVAEEL-AYGCTGIMTAMEASGLGQTPIIIA-GNKEQQKKYLGRLIDEPLVAAY 582
+AEEL + C G+ A+ TP ++ G++E ++++L I V
Sbjct: 319 DYSFSVAMAEELGSIKCGGVPMAIGVQADMATPALVRFGSEELKQQFLVPTIAGDFVTCL 378
Query: 583 GVTEPGAGSDVAGIKTRAEKKGDEWILNGQKMWITNGGVANWYFVLART 729
GV+E GAGSDVA IKT A K GD++++NG KMW TNG A+W +LA T
Sbjct: 379 GVSETGAGSDVASIKTTAVKDGDDYVINGGKMWTTNGIQADWMCLLANT 427
>SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 99.1 bits (236), Expect = 3e-21
Identities = 50/156 (32%), Positives = 80/156 (51%)
Frame = +1
Query: 226 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMD 405
+L + + L++ R F +E+ PVAG++DK YP VK E+GL+ +PE GG
Sbjct: 40 KLPETHEMLRKTCRDFADNELTPVAGKFDKEHRYPQEKVKMLGELGLLGVEVPESLGGTG 99
Query: 406 MGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYG 585
+ F + EE++ GC + M + G Q+++++ ++ V +
Sbjct: 100 LDAFAYAIAMEEISRGCASLGCIMSVNNY--------GTDAQKEEWIKPFLNGDRVGCFA 151
Query: 586 VTEPGAGSDVAGIKTRAEKKGDEWILNGQKMWITNG 693
++EP GSD KT A GD ++LNG K WITNG
Sbjct: 152 LSEPDNGSDAGAAKTTAVLDGDHYVLNGTKAWITNG 187
>SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 93.5 bits (222), Expect = 2e-19
Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Frame = +1
Query: 226 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMD 405
+L++E++ +++ +F K++I P+ + D+ + ++K +E GLM I GG D
Sbjct: 41 QLSEEEEMMKQSVARFAKEKIQPLVSEMDQNSQMDPGIIKGLFEQGLMGIEIGSEYGGTD 100
Query: 406 MGVFDGCLVAEELAYGCTGIMTAMEASG-LGQTPIIIAGNKEQQKKYLGRLIDEPLVAAY 582
F LV EELA + + L I+ G KEQ+++YL +L +V +
Sbjct: 101 STFFAANLVIEELAKVDPSVSVMCDVQNTLINNLIMTYGTKEQKQEYLPQLAQH-MVGGF 159
Query: 583 GVTEPGAGSDVAGIKTRAEKKGDEWILNGQKMWITNGGVANWYFVLA 723
++E +GSD +KT A +K ++LNG KMWITN A + V+A
Sbjct: 160 CLSEESSGSDAFALKTVALEKDGHFVLNGSKMWITNAEYAGVFLVMA 206
>SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27)
Length = 257
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = +1
Query: 568 LVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGQKMWITNGGVANWYFVLART 729
+V GV+E GAGSDVAG+KT A+K GD++++NG KMWITN A++ +LA T
Sbjct: 1 MVGCIGVSEVGAGSDVAGLKTTAKKDGDDYVINGSKMWITNSPSADFICLLANT 54
>SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/61 (36%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Frame = +1
Query: 517 GNKEQQKKYLGRLIDEPLVAAYGVTEPG-AGSDVAGIKTRAEKKGDEWILNGQKMWITNG 693
G+ EQ+KK+L L++ + +A+ +TEPG A SD ++ + + GD +++NG+K W +
Sbjct: 138 GSPEQKKKWLDPLLNGEMRSAFCMTEPGVASSDATNMECKITRHGDHYVINGRKWWSSGA 197
Query: 694 G 696
G
Sbjct: 198 G 198
>SB_10343| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=0.00044)
Length = 156
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/56 (37%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 517 GNKEQQKKYLGRLIDEPLVAAYGVTEPG-AGSDVAGIKTRAEKKGDEWILNGQKMW 681
G+ EQ+KK+L L++ + +A+ +TEPG A SD ++ + + GD +++NG+K W
Sbjct: 98 GSPEQKKKWLDPLLNGDIRSAFCMTEPGVASSDATNMECKITRHGDHYVINGRKWW 153
>SB_47347| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=1e-17)
Length = 551
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +1
Query: 505 IIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPG-AGSDVAGIKTRAEKKGDEWILNGQKMW 681
+I G+ Q++K+L L+D + + + +TEP A SD A I++ GD ++LNG+K W
Sbjct: 318 LIRYGSDAQKEKWLEPLLDGRIRSCFAMTEPQVASSDAANIESSIRVDGDHYVLNGRKWW 377
Query: 682 IT 687
I+
Sbjct: 378 IS 379
>SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 35.5 bits (78), Expect = 0.044
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Frame = +1
Query: 505 IIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRA--EKKGDEWILN---- 666
++ G + K L + V +G+TE G G++ ++T A +K+ E+++N
Sbjct: 169 VLKLGTERHHSKLLKGIDSLQEVGCFGLTELGYGNNAVQMETTAVYDKETKEFVVNTPSP 228
Query: 667 -GQKMWITNGGV-ANWYFVLART 729
QK WITNG A+ V A+T
Sbjct: 229 LAQKYWITNGACHAHHIVVFAQT 251
>SB_55185| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=4.5e-16)
Length = 647
Score = 33.1 bits (72), Expect = 0.24
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 433 AEELAYGCTGIM-TAMEAS-GLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAG 606
A ELA G M T M L ++ G + K L + V +G+TE G G
Sbjct: 122 AHELAAVVDGSMATKMTVQFNLFGGTVLKLGTERHHSKLLKGIDSLEDVGCFGLTELGYG 181
Query: 607 SDVAGIKTRA--EKKGDEWILN-----GQKMWITNG 693
++ ++T A + + E+I+N QK WITNG
Sbjct: 182 NNAVQMETTATYDNETQEFIVNTPSTLAQKYWITNG 217
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 31.5 bits (68), Expect = 0.72
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Frame = -2
Query: 668 PFRIHSSPFFSALVFIPATSDPAPGSVTP*AATNGSSISLPRYFFCCSLFPAIMMGVWPS 489
P + SSP S P+ S +PG +P + ++G S + P Y + P+
Sbjct: 417 PAFMPSSPSMSPAS--PSYSPTSPG-YSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPT 473
Query: 488 PLASIAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL- 312
+ P + S + PS +P S P S P PTS ++ T YSP
Sbjct: 474 SPSYSPTSPSYSPTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSP 531
Query: 311 SY*PAT 294
SY P +
Sbjct: 532 SYSPTS 537
Score = 29.1 bits (62), Expect = 3.9
Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Frame = -2
Query: 620 PATSDP-APGSVTP*AATNGSSISLPRYFFCC-SLFPA------IMMGVWPS-PLASIAV 468
P + P +P +P AA+ G S S P + S+ PA G PS P + +
Sbjct: 392 PVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSP 451
Query: 467 IIPVH-PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 294
P + P + S + PS +P S P S P PTS ++ T YSP SY P +
Sbjct: 452 ASPSYSPTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 509
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 452 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 294
P + S + PS +P S P S P PTS ++ T YSP SY P +
Sbjct: 500 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 551
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 452 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 294
P + S + PS +P S P S P PTS ++ T YSP SY P +
Sbjct: 514 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 565
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 452 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 294
P + S + PS +P S P S P PTS ++ T YSP SY P +
Sbjct: 528 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 579
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 452 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 294
P + S + PS +P S P S P PTS ++ T YSP SY P++
Sbjct: 542 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSS 593
>SB_42487| Best HMM Match : Extensin_2 (HMM E-Value=0.084)
Length = 635
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = -3
Query: 427 DNHQTHPCPYHRNVLECVRSLGQLPKPSLQR---ATGTPPSYHIDPPQE*FHPS 275
D HP +HR V R + Q PS+ R TPPS I + HP+
Sbjct: 450 DASPLHPAGFHRRVTPPSRGISQTRHPSIPRDLTDVCTPPSRGISQTRSPLHPA 503
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -3
Query: 412 HPCPYHRNVLECVRSLGQLPKPSLQR---ATGTPPSYHIDPPQE*FHPS 275
HP +HR V R + Q PS+ R TPPS I + HP+
Sbjct: 199 HPAGFHRRVTPPSRGISQTRHPSIPRDFTDAFTPPSRGISQTRSPLHPA 247
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 30.7 bits (66), Expect = 1.3
Identities = 34/105 (32%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = -2
Query: 626 FIPATSDPAPGSVTP*AATNGSSISLPRYFFCC-SLFPAIMMGVWPSPLASIAVIIPVHP 450
+ P + +P S + +A+ S + P Y S PAI SP S A P +
Sbjct: 689 YSPTSPSYSPASPSYTSASPSYSPASPSYSPTSPSYSPAIPSNSPASPSYSPAS--PSYT 746
Query: 449 YASSSAT-RQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSP 318
AS S T PS TP S P + P PTS ++ T YSP
Sbjct: 747 PASPSYTPASPSYTPAS--PSYTPTIPSYSPTSPSYSPTSPSYSP 789
>SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1046
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 229 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVG 363
LT+ L + K E A Y+ TG W VV +AW VG
Sbjct: 591 LTESALNLASICSKVHHGEANLAADYYEMTGLPLWEVVNRAWNVG 635
>SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -2
Query: 452 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVLSY*PATGMISSF 276
P S S R+PS P S+P C + PTS + G G S + P + + F
Sbjct: 651 PKTSGSLAREPSTAP-SLP------CDLVAPTSAKMYLAGQGGSGKTEWAPDSQQLEVF 702
>SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -2
Query: 482 ASIAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSP 318
A+ + ++P P +S S QPS+TP+ PP G TS + + H P
Sbjct: 379 ATSSSMLPNTPSSSPSTGTQPSSTPIHEPP-TQGTTLVTMETSTSHLKSSHHSRP 432
>SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -2
Query: 527 SLFPAIMMGVWPSPLASIAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQ 351
S+ P+I + PS SI I +S QP++ P S P P +P SQ
Sbjct: 20 SIHPSIQPSIQPSIHPSIHPSIQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 78
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,290,739
Number of Sequences: 59808
Number of extensions: 538636
Number of successful extensions: 2120
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2096
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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